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1. phac-nml/sistr_cmd phac-nml/sistr_cmd Public

   SISTR (Salmonella In Silico Typing Resource) command-line tool

   Python 26 9

2. phac-nml/biohansel phac-nml/biohansel Public

   Rapidly subtype microbial genomes using single-nucleotide variant (SNV) subtyping schemes

   Python 26 7

3. nf-villumina nf-villumina Public

   Generic viral Illumina sequence analysis pipeline

   Nextflow 4 5

4. sublime-nextflow sublime-nextflow Public

   Nextflow workflow syntax highlighting and snippets for Sublime Text 4

   Python 24 5

5. nf-flu nf-flu Public

   Influenza genome analysis Nextflow workflow

   Nextflow 22 20

6. xlavir xlavir Public

   Excel report from bioinformatics analysis of viral seq data with nf-core/viralrecon and other Nextflow workflows

   HTML 2 2