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emarinier committed Nov 1, 2024
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2 changes: 1 addition & 1 deletion NOTICE.txt
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Neptune

Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024

Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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5 changes: 2 additions & 3 deletions README.md
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Neptune

Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024

Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory

Funded by the National Micriobiology Laboratory and the Genome Canada / Alberta
Innovates Bio Solutions project "Listeria Detection and Surveillance using Next Generation Genomics"
Funded by the National Micriobiology Laboratory and the Genome Canada / Alberta Innovates Bio Solutions project "Listeria Detection and Surveillance using Next Generation Genomics"

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this work except in compliance with the License. You may obtain a copy of the License at:

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2 changes: 1 addition & 1 deletion documentation/math/Mathematics.bib
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% ==============================================================================
% Copyright Government of Canada 2015-2016
% Copyright Government of Canada 2015-2024
%
% Written by: Eric Marinier, Public Health Agency of Canada,
% National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion documentation/math/Mathematics.tex
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% ==============================================================================
% Copyright Government of Canada 2015-2016
% Copyright Government of Canada 2015-2024
%
% Written by: Eric Marinier, Public Health Agency of Canada,
% National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion mkdocs.yml
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theme: cinder
repo_url: "https://github.com/phac-nml/neptune"
site_favicon: neptune.ico
copyright: "Neptune is licensed under the <a href='https://github.com/phac-nml/neptune/blob/release/1.2/LICENSE.txt'>Apache License Version 2.0</a><br>Copyright Government of Canada 2015-2017"
copyright: "Neptune is licensed under the <a href='https://github.com/phac-nml/neptune/blob/release/1.2/LICENSE.txt'>Apache License Version 2.0</a><br>Copyright Government of Canada 2015-2024"

pages:
- Home: index.md
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2 changes: 1 addition & 1 deletion src/neptune/AggregateKMers.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/ConsolidateSignatures.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/CountKMers.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/Database.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/Execution.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/ExtractSignatures.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/FilterSignatures.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/JobManager.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/JobManagerParallel.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/Neptune.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/PrepareKMers.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/Signature.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion src/neptune/Utility.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2017
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/TestingUtility.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_aggregate.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_count.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_database.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_execution.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_extract.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_filter.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_job_manager.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_neptune.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_signature.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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2 changes: 1 addition & 1 deletion tests/test_utility.py
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"""
# =============================================================================
Copyright Government of Canada 2015-2016
Copyright Government of Canada 2015-2024
Written by: Eric Marinier, Public Health Agency of Canada,
National Microbiology Laboratory
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