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emarinier committed Nov 20, 2024
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6 changes: 2 additions & 4 deletions 404.html
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<li class="toctree-l1"><a class="reference internal" href="/install/">Neptune</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Running</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="/parameters/">Parameters</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="/examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="/examples/">Simple Examples</a>
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<li class="toctree-l1"><a class="reference internal" href="../install/">Neptune</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Running</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple Examples</a>
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<link rel="shortcut icon" href="../img/favicon.ico">
<title>Simple - Neptune</title>
<title>Simple Examples - Neptune</title>
<link rel="stylesheet" href="../css/theme.css" />
<link rel="stylesheet" href="../css/theme_extra.css" />
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.12.0/styles/github.min.css" />

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<li class="toctree-l1"><a class="reference internal" href="../install/">Neptune</a>
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</ul>
<ul>
<p class="caption"><span class="caption-text">Running</span></p>
<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul class="current">
<li class="toctree-l1 current"><a class="reference internal current" href="./">Simple</a>
<li class="toctree-l1 current"><a class="reference internal current" href="./">Simple Examples</a>
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<li class="toctree-l2"><a class="reference internal" href="#basic-execution">Basic Execution</a>
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<li>Examples &raquo;</li>
<li>Running &raquo;</li>



<li>Simple</li>
<li>Simple Examples</li>
<li class="wy-breadcrumbs-aside">

<a href="https://github.com/phac-nml/neptune/edit/master/docs/examples.md"
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<li class="toctree-l1"><a class="reference internal" href="../install/">Neptune</a>
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<p class="caption"><span class="caption-text">Running</span></p>
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<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple Examples</a>
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8 changes: 3 additions & 5 deletions index.html
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<li class="toctree-l1"><a class="reference internal" href="install/">Neptune</a>
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<p class="caption"><span class="caption-text">Running</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="parameters/">Parameters</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="examples/">Simple Examples</a>
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<li class="toctree-l1"><a class="reference internal" href="walkthrough/">Walkthrough</a>
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</ul>
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<p class="caption"><span class="caption-text">Running</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple Examples</a>
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<li class="toctree-l1"><a class="reference internal" href="../install/">Neptune</a>
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<p class="caption"><span class="caption-text">Running</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
</li>
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<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple Examples</a>
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<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
</li>
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<p class="caption"><span class="caption-text">Examples</span></p>
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<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple Examples</a>
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<li class="toctree-l1"><a class="reference internal" href="../install/">Neptune</a>
</li>
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<p class="caption"><span class="caption-text">Running</span></p>
<ul class="current">
<li class="toctree-l1 current"><a class="reference internal current" href="./">Parameters</a>
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</li>
</ul>
</li>
</ul>
<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple Examples</a>
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<li><a href="..">Docs</a> &raquo;</li>



<li>Running &raquo;</li>



<li>Parameters</li>
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6 changes: 2 additions & 4 deletions search.html
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<li class="toctree-l1"><a class="reference internal" href="./install/">Neptune</a>
</li>
</ul>
<p class="caption"><span class="caption-text">Running</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="./parameters/">Parameters</a>
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<p class="caption"><span class="caption-text">Examples</span></p>
<ul>
<li class="toctree-l1"><a class="reference internal" href="./examples/">Simple</a>
<li class="toctree-l1"><a class="reference internal" href="./examples/">Simple Examples</a>
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<p class="caption"><span class="caption-text">Running</span></p>
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<li class="toctree-l1"><a class="reference internal" href="../parameters/">Parameters</a>
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<p class="caption"><span class="caption-text">Examples</span></p>
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<li class="toctree-l1"><a class="reference internal" href="../examples/">Simple</a>
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<li class="toctree-l1 current"><a class="reference internal current" href="./">Walkthrough</a>
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<li>Examples &raquo;</li>
<li>Running &raquo;</li>



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