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Adds the ability to handle promoters (regions with both promoter nucleotide information and non-promoter codon information)
Adds handling of insertions and deletions in nucleotide and codon sequence
Updates list of supported PointFinder species to salmonella, campylobacter, enterococcus_faecalis, enterococcus_faecium, escherichia_coli, helicobacter_pylori.
Switch name e.coli to escherichia_coli in PointFinder gene-drug key to match organism name in PointFinder database.