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Pre requisite installations
This page lists instructions on how to install the pre-requisites for PICRUSt2.
Commands below are assuming that you are working in a Linux environment.
It is presumed that you have a "bin" directory within your home directory (e.g. "~/bin") and this directory is within your PATH environment variable. If you don't have this, then go Google it now.
cd wget -qO- https://sco.h-its.org/exelixis/resource/download/software/papara_nt-2.5-static_x86_64.tar.gz | tar xvz mv papara_static_x86_64 ~/bin/papara
cd
git clone --recursive https://github.com/Pbdas/epa.git
cd epa
make
ln -s ~/epa/bin/epa-ng ~/bin/
*Note: if the make command fails then you likely need to install various packages for compilation:
sudo apt-get install autotools-dev libtool flex bison cmake automake autoconf
Please first check our FAQ if you have any questions about PICRUSt2.
For other general questions and comments about PICRUSt2 please search the PICRUSt google group. If the question has not been previously answered then please make a new thread.
To report a bug or to make a feature request please make a new issue at the top of this page.