tests: ci: Use nbmake instead of papermill for executing the notebooks #51
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| name: test | |
| on: | |
| push: | |
| branches: | |
| - "main" | |
| - "master" | |
| paths: | |
| - "**.py" | |
| - ".github/workflows/*test*.yml" | |
| - "pyproject.toml" | |
| - "poetry.lock" | |
| - "requirements/requirements*.txt" | |
| pull_request: | |
| paths: | |
| - "**.py" | |
| - ".github/workflows/*test*.yml" | |
| - "pyproject.toml" | |
| - "poetry.lock" | |
| - "requirements/requirements*.txt" | |
| jobs: | |
| test: | |
| name: test Python ${{ matrix.python }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python: ["3.9", "3.10", "3.11", "3.12"] | |
| # include: | |
| # - os: "macos-latest" | |
| # python: "3.12" | |
| steps: | |
| - uses: actions/checkout@main | |
| - uses: actions/setup-python@main | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - uses: actions/cache@main | |
| id: cache | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: test-${{ runner.os }}-${{ env.pythonLocation }}-${{ hashFiles('pyproject.toml', 'requirements/*') }} | |
| - uses: actions/cache@main | |
| id: cache-netcdfs | |
| with: | |
| path: | | |
| notebooks/schout_adcirc_20230828.nc | |
| notebooks/schout_adcirc_20230829.nc | |
| notebooks/schout_adcirc_20230830.nc | |
| key: test-stofs-3d-atl-netcdf-files | |
| - run: python --version | |
| - run: python -m pip install --upgrade pip | |
| - run: python -m pip --version | |
| - run: sudo apt-get install -y --no-install-recommends libgeos-dev | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| - run: python -m pip install -r requirements/requirements-dev.txt | |
| - run: python -m pip install ./ | |
| - run: pytest --version | |
| - run: python -m pip cache info | |
| - run: mypy thalassa | |
| if: ${{ matrix.python == '3.12' }} # We only run on a single matrix OS in order to speed up CI runtime | |
| - run: make cov | |
| - run: make exec_notebooks | |
| if: ${{ matrix.python == '3.12' }} # We only run on a single matrix OS in order to speed up CI runtime | |
| - uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| fail_ci_if_error: false |