This repository is created for learning container development with OpenGL support. fsl and fsleyes in particular, are the target software.
View FSL license below: https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Licence A salient clause of the license states it is not free for commercial use. So, if you use this image, make sure you are aware of that limitation. The maintainer of this image is not and cannot be held liable for unlawful use of this image
Table of contents created by gh-md-toc
A separate repository details requisite software and environment. See https://github.com/tashrifbillah/glxgears-containers In particular, the following sections should be useful:
https://github.com/tashrifbillah/glxgears-containers#linuxmac
https://github.com/tashrifbillah/glxgears-containers#windows
https://github.com/tashrifbillah/glxgears-containers#linuxmac-1
https://github.com/tashrifbillah/glxgears-containers#windows-1
(i) build
docker build -t tbillah/fsl-6.0.1-centos7 -f Dockerfile.centos7 .
(ii) push
docker push tbillah/fsl-6.0.1-centos7
(iii) pull
docker pull tbillah/fsl-6.0.1-centos7
(iv) run
Linux/OSX
docker run --rm -ti --privileged -e DISPLAY=$DISPLAY -v /tmp/.X11-unix:/tmp/.X11-unix tbillah/fsl-6.0.1-centos7
Details can be found here
Windows
Follow steps mentioned here and use tbillah/fsl-6.0.1-centos7 instead of glxgears-docker. Eventually, you would use
docker run --rm -ti --privileged -e DISPLAY=$DISPLAY tbillah/fsl-6.0.1-centos7
(i) build
singularity build fsl-6.0.1-centos7 Singularity.centos7
(ii) push
singularity push fsl-6.0.1-centos7 library://tbillah/collection/fsl-6.0.1-centos7
(iii) pull
singularity pull library://tbillah/collection/fsl-6.0.1-centos7
(iv) run
Linux/OSX
singularity shell --writable-tmpfs fsl-6.0.1-centos7
(inside the shell) fsleyes
Details can be found here
Windows
You need a GUI desktop to run Singularity containers. Follow steps mentioned here. Eventually, you would use
singularity shell --writable-tmpfs fsl-6.0.1-centos7
(inside the shell) fsleyes