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Regular expression patterns for alllele variant features as described in the publication

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pombase/allele_gene_variant_features_regex

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Regular expressions for PomBase variant nomenclature

This repository contains a single test script that can be ran on python 3.9 (tested on 3.9.7), without installing any extra dependencies.

The test script defines a dictionary that contains all possible cases outlined in the paper. There might be a combination of existing patterns that is not defined in the current cases, but it should be easy to capture with the provided examples.

To run the tests simply run:

python test_regex.py

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Regular expression patterns for alllele variant features as described in the publication

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