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Use Node v20 and Pandoc v3.1.13
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kimrutherford committed Nov 23, 2024
1 parent 4d616c2 commit 752ec73
Showing 1 changed file with 5 additions and 2 deletions.
7 changes: 5 additions & 2 deletions .github/workflows/test-website.yml
Original file line number Diff line number Diff line change
Expand Up @@ -22,17 +22,20 @@ jobs:
- name: Prerequisites
run: |
sudo apt-get update
sudo apt-get -y install libjson-perl libperlio-gzip-perl libgd-perl libjson-perl pandoc libyaml-perl
sudo apt-get -y install libjson-perl libperlio-gzip-perl libgd-perl libjson-perl libyaml-perl
(cd /tmp/; curl -O -L https://github.com/jgm/pandoc/releases/download/3.1.13/pandoc-3.1.13-1-amd64.deb; sudo dpkg -i pandoc-3.1.13-1-amd64.deb)
(curl -L http://cpanmin.us | sudo perl - --self-upgrade) && sudo cpanm --notest Pandoc Text::CSV
git clone https://github.com/pombase/curation.git pombase-curation
git clone https://github.com/pombase/genome_changelog.git genome_changelog
cp -r genome_changelog/results/pombase_tables data_files
curl -fsSL https://deb.nodesource.com/setup_20.x | sudo -E bash -
sudo apt-get update
sudo apt-get install nodejs -y
curl -OL http://current.geneontology.org/metadata/GO.xrf_abbs
curl -OL https://raw.githubusercontent.com/pombase/pombase-config/master/website/trackListTemplate.json
curl -OL https://raw.githubusercontent.com/pombase/pombase-config/master/website/pombase_jbrowse_track_metadata.csv
curl -OL https://raw.githubusercontent.com/pombase/pombase-chado/master/etc/create_jbrowse_track_list.pl && chmod a+x create_jbrowse_track_list.pl
curl -OL https://raw.githubusercontent.com/japonicusdb/japonicus-config/main/japonicus_site_config.json
(cd /tmp/; curl -O -L https://github.com/jgm/pandoc/releases/download/2.8/pandoc-2.8-1-amd64.deb; sudo dpkg -i pandoc-2.8-1-amd64.deb)
yarn
- name: Test
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