Update 2022_Fischer_Gauls/2022_Fischer_Gauls.janno

poseidon-framework · Nov 28, 2024 · 6ad11f3 · 6ad11f3
1 parent 3282da4
commit 6ad11f3
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/2022_Fischer_Gauls/2022_Fischer_Gauls.janno b/2022_Fischer_Gauls/2022_Fischer_Gauls.janno
@@ -47,4 +47,4 @@ CLR35_MNT	M	French_IA_South	n/a	CLR35	n/a	n/a	n/a	n/a	n/a	France	FR	France, Aude
 GDF1348_MNT	M	French_IA_Paris_Basin	n/a	GDF1348	n/a	n/a	n/a	n/a	n/a	France	FR	France, Aube, Barbuise les Grèves de Frécul	les Grèves de Frécul	48.55	3.5833	contextual	n/a	n/a	n/a	500	400	300	n/a	H	R1b1a1b1a1a2c1a3a2a1b1a1b	osteological remain	1	GDF1348	Shotgun	half	ds	haploid	https://github.com/nf-core/eager/releases/tag/2.4.6	52.00599	408977	n/a	0.1078131524575097	0.005634	4.270182e-15	ANGSD[v0.935]	Nr Snps (per library): 1023. Estimate and error are weighted means of values per library. Libraries with fewer than 100 SNPs used in contamination estimation were excluded.	PRJEB50940;ERS10593628;ERR8613034 	S. Rottier	FischerIScience2022	n/a	n/a	GDF1348	0.33620544672179	0.39983484457802504	0.0037242211688210004	0.0050016676756330005
 GDF1264_MNT	M	French_IA_Paris_Basin	n/a	GDF1264	n/a	n/a	n/a	n/a	n/a	France	FR	France, Aube, Barbuise les Grèves de Frécul	les Grèves de Frécul	48.55	3.5833	contextual	n/a	n/a	n/a	500	400	300	n/a	H2b	R1b1a1b1a1a2	osteological remain	1	GDF1264	Shotgun	half	ds	haploid	https://github.com/nf-core/eager/releases/tag/2.4.6	66.305023	525495	n/a	0.0958536570172676	0.005101	4.475116e-15	ANGSD[v0.935]	Nr Snps (per library): 2201. Estimate and error are weighted means of values per library. Libraries with fewer than 100 SNPs used in contamination estimation were excluded.	PRJEB50940;ERS10593626;ERR8613032 	S. Rottier	FischerIScience2022	n/a	n/a	GDF1264	0.326942311776445	0.38285440164984	0.0029051346883480003	0.003871426972577
 GDF1231_MNT	F	French_IA_Paris_Basin	n/a	GDF1231	n/a	n/a	n/a	n/a	n/a	France	FR	France, Aube, Barbuise les Grèves de Frécul	les Grèves de Frécul	48.55	3.5833	contextual	n/a	n/a	n/a	500	400	300	n/a	HV0	n/a	osteological remain	1	GDF1231	Shotgun	half	ds	haploid	https://github.com/nf-core/eager/releases/tag/2.4.6	57.829828	616663	n/a	0.0770667575759406	0.3458799999999999	1.1092300000000001e-12	ANGSD[v0.935]	Nr Snps (per library): 7170. Estimate and error are weighted means of values per library. Libraries with fewer than 100 SNPs used in contamination estimation were excluded.	PRJEB50940;ERS10593625;ERR8613031 	S. Rottier	FischerIScience2022	n/a	n/a	GDF1231	0.8379434794422981	0.006086319425069001	0.004780385319893	0.000493708346235
-GDF1349B_MNT	F	French_IA_Paris_Basin	n/a	GDF1349B	n/a	n/a	n/a	n/a	n/a	France	FR	France, Aube, Barbuise les Grèves de Frécul	les Grèves de Frécul	48.55	3.5833	contextual	n/a	n/a	n/a	500	400	300	n/a	T1a4	n/a	osteological remain	1	GDF1349B	Shotgun	half	ds	haploid	https://github.com/nf-core/eager/releases/tag/2.4.6	36.872557	882548	n/a	0.2418592065365107	0.256019	4.753463e-12	ANGSD[v0.935]	Nr Snps (per library): 17959. Estimate and error are weighted means of values per library. Libraries with fewer than 100 SNPs used in contamination estimation were excluded.	PRJEB50940;ERS10593629;ERR8613035 	S. Rottier	FischerIScience2022	n/a	n/a	GDF1349B	0.928644935148734	0.005939640099947001	0.0037510858054680004	0.000362851857817
+GDF1349B_MNT	F	French_IA_Paris_Basin	n/a	GDF1349B	n/a	n/a	n/a	n/a	n/a	France	FR	France, Aube, Barbuise les Grèves de Frécul	les Grèves de Frécul	48.55	3.5833	contextual	n/a	n/a	n/a	500	400	300	n/a	T1a4	n/a	osteological remain	1	GDF1349B	Shotgun	half	ds	haploid	https://github.com/nf-core/eager/releases/tag/2.4.6	36.872557	882548	n/a	0.2418592065365107	0.256019	4.753463e-12	ANGSD[v0.935]	Nr Snps (per library): 17959. Estimate and error are weighted means of values per library. Libraries with fewer than 100 SNPs used in contamination estimation were excluded.	PRJEB50940;ERS10593629;ERR8613035 	S. Rottier	FischerIScience2022	n/a	n/a	GDF1349B	0.928644935148734	0.005939640099947001	0.0037510858054680004	0.000362851857817