Install FastqPuri

https://github.com/jengelmann/FastqPuri

1. Build docker image from latest GH
2. Build apptainer image from docker image

• Use multi-exec format for executables in /usr/local/bin

Build docker image

curl -Lo jengelmann-fastqpuri-bf88549.zip https://github.com/jengelmann/FastqPuri/archive/bf88549580ead8e8b0e620331f840e9119586a77.zip
unzip jengelmann-fastqpuri-bf88549.zip
cd FastqPuri-bf88549580ead8e8b0e620331f840e9119586a77
docker build -t fastqpuri:bf88549 .

Build Apptainer image

Using the definition file.

sudo -E apptainer build fastqpuri.sif Apptainer.bf88549

make symlinks for executables

apptainer exec fastqpuri.sif ls /usr/local/bin | xargs -L1 ln -s fastqpuri.sif