Add su2 adapter tests and update reference results

elastic-tube-1d/reference_results.metadata

@@ -11,28 +11,30 @@ We also include some information on the machine used to generate them
 
 | name | time | sha256 |
 |------|------|-------|
-| fluid-cpp_solid-cpp.tar.gz | 2024-03-21 09:41:34 | 8b00ccdcd8f2ddb4c1fc115dbaf9ee36bb03ba0f9fb98a3498dcc1d389acaf3b |
-| fluid-cpp_solid-python.tar.gz | 2024-03-21 09:41:34 | 0fe449e0890c9906b7f132bc12c978621bedb2f12fc678f367e5b12823e2543e |
-| fluid-python_solid-python.tar.gz | 2024-03-21 09:41:34 | 4ad401034b1d980c0584bbbb09dc17c8e2723ec195a1f041e4a246e41ded7092 |
+| fluid-cpp_solid-cpp.tar.gz | 2024-04-13 12:00:34 | 501038f52ba09cea3e7d430f26ff8ca88b301e0aa38862ce894cabaf47237490 |
+| fluid-python_solid-python.tar.gz | 2024-04-13 12:00:34 | 553e17167087ce036096c5319d41e322f28e9fbd9da32a63b28002e26ea023df |
+| fluid-cpp_solid-python.tar.gz | 2024-04-13 12:00:34 | 0d2520075e8ecdcee88288cf91f8da7af2b805771241200168455ed117b13a6a |
 
 ## List of arguments used to generate the files
 
 | name | value |
 |------|------|
-| PRECICE_REF | v3.0.0 |
-| OPENFOAM_EXECUTABLE | openfoam2306 |
+| PRECICE_REF | v3.1.1 |
+| OPENFOAM_EXECUTABLE | openfoam2312 |
 | OPENFOAM_ADAPTER_REF | v1.3.0 |
-| PYTHON_BINDINGS_REF | v3.0.0.0 |
+| PYTHON_BINDINGS_REF | v3.1.0 |
 | FENICS_ADAPTER_REF | v2.1.0 |
-| TUTORIALS_REF | 3f139d36f1708fb3ebfde2c48f14b1df94c9d70a |
+| TUTORIALS_REF | 340b447 |
 | PLATFORM | ubuntu_2204 |
 | CALULIX_VERSION | 2.20 |
 | CALULIX_ADAPTER_REF | v2.20.1 |
+| SU2_VERSION | 7.5.1 |
+| SU2_ADAPTER_REF | 64d4aff |
 ## Information about the machine
 
 ### uname -a
 
-Linux precice-tests 5.15.0-91-generic #101-Ubuntu SMP Tue Nov 14 13:30:08 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
+Linux precice-tests 5.15.0-101-generic #111-Ubuntu SMP Tue Mar 5 20:16:58 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux
 
 
 ### lscpu

flow-over-heated-plate/reference_results.metadata

@@ -11,28 +11,30 @@ We also include some information on the machine used to generate them
 
 | name | time | sha256 |
 |------|------|-------|
-| fluid-openfoam_solid-openfoam.tar.gz | 2024-03-21 09:41:34 | ff95baa77b582eceb69d726b113df2ca340829fb2ca1c2c083c2f96f65908c10 |
-| fluid-openfoam_solid-nutils.tar.gz | 2024-03-21 09:41:34 | 4cf68dae854f23fa773cea329b06f2046a5cb3c4ec5ba8b9f4c363010fd9613a |
-| fluid-openfoam_solid-fenics.tar.gz | 2024-03-21 09:41:34 | efe8b31a945bed1aec706747dcac70acbf8fb5cc88a79e797e52ca86d403d78a |
+| fluid-openfoam_solid-nutils.tar.gz | 2024-04-13 12:00:34 | 13557384af972d30f6b6d7fcf07429b2d99a463d1e9358d19ea72665fd06279e |
+| fluid-openfoam_solid-openfoam.tar.gz | 2024-04-13 12:00:34 | da907862142542501da920b8dde9d81cc53e947bd72dc59a8df59dc8e3b28348 |
+| fluid-openfoam_solid-fenics.tar.gz | 2024-04-13 12:00:34 | 656007eaa973f35c421a3b9ec340a06145fd065041e33f10efe023ab127a4552 |
 
 ## List of arguments used to generate the files
 
 | name | value |
 |------|------|
-| PRECICE_REF | v3.0.0 |
-| OPENFOAM_EXECUTABLE | openfoam2306 |
+| PRECICE_REF | v3.1.1 |
+| OPENFOAM_EXECUTABLE | openfoam2312 |
 | OPENFOAM_ADAPTER_REF | v1.3.0 |
-| PYTHON_BINDINGS_REF | v3.0.0.0 |
+| PYTHON_BINDINGS_REF | v3.1.0 |
 | FENICS_ADAPTER_REF | v2.1.0 |
-| TUTORIALS_REF | 3f139d36f1708fb3ebfde2c48f14b1df94c9d70a |
+| TUTORIALS_REF | 340b447 |
 | PLATFORM | ubuntu_2204 |
 | CALULIX_VERSION | 2.20 |
 | CALULIX_ADAPTER_REF | v2.20.1 |
+| SU2_VERSION | 7.5.1 |
+| SU2_ADAPTER_REF | 64d4aff |
 ## Information about the machine
 
 ### uname -a
 
-Linux precice-tests 5.15.0-91-generic #101-Ubuntu SMP Tue Nov 14 13:30:08 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
+Linux precice-tests 5.15.0-101-generic #111-Ubuntu SMP Tue Mar 5 20:16:58 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux
 
 
 ### lscpu

perpendicular-flap/metadata.yaml

@@ -19,11 +19,11 @@ cases:
     run: ./run.sh 
     component: openfoam-adapter
 
-  # fluid-su2:
-  #   participant: Fluid
-  #   directory: ./fluid-su2
-  #   run: ./run.sh
-  #   component: su2-adapter
+  fluid-su2:
+    participant: Fluid
+    directory: ./fluid-su2
+    run: ./run.sh
+    component: su2-adapter
 
   solid-calculix:
     participant: Solid

perpendicular-flap/reference_results.metadata

@@ -11,26 +11,29 @@ We also include some information on the machine used to generate them
 
 | name | time | sha256 |
 |------|------|-------|
-| fluid-openfoam_solid-calculix.tar.gz | 2024-03-21 09:41:34 | b974131b50bfb199f695d066f74100a75f633fba472020e78c3fc0d52b8ad36b |
+| fluid-su2_solid-fenics.tar.gz | 2024-04-13 12:00:34 | d74d72729eb88049f067eb794768948d01f58e0b8f0db7e542c2d9da0643c7b5 |
+| fluid-openfoam_solid-calculix.tar.gz | 2024-04-13 12:00:34 | 863c5078f8068135a983b24433d8d71120c2fdd67d6ab93b9dc1a4642ee595ba |
 
 ## List of arguments used to generate the files
 
 | name | value |
 |------|------|
-| PRECICE_REF | v3.0.0 |
-| OPENFOAM_EXECUTABLE | openfoam2306 |
+| PRECICE_REF | v3.1.1 |
+| OPENFOAM_EXECUTABLE | openfoam2312 |
 | OPENFOAM_ADAPTER_REF | v1.3.0 |
-| PYTHON_BINDINGS_REF | v3.0.0.0 |
+| PYTHON_BINDINGS_REF | v3.1.0 |
 | FENICS_ADAPTER_REF | v2.1.0 |
-| TUTORIALS_REF | 3f139d36f1708fb3ebfde2c48f14b1df94c9d70a |
+| TUTORIALS_REF | 340b447 |
 | PLATFORM | ubuntu_2204 |
 | CALULIX_VERSION | 2.20 |
 | CALULIX_ADAPTER_REF | v2.20.1 |
+| SU2_VERSION | 7.5.1 |
+| SU2_ADAPTER_REF | 64d4aff |
 ## Information about the machine
 
 ### uname -a
 
-Linux precice-tests 5.15.0-91-generic #101-Ubuntu SMP Tue Nov 14 13:30:08 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
+Linux precice-tests 5.15.0-101-generic #111-Ubuntu SMP Tue Mar 5 20:16:58 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux
 
 
 ### lscpu

tools/tests/README.md

@@ -21,7 +21,7 @@ Workflow for the preCICE v3 release testing:
 3. Trigger the GitHub Actions Workflow. Until we merge the workflow to develop, this can only happen via the [GitHub CLI](https://cli.github.com/):
 
     ```bash
-    gh workflow run run_testsuite_manual.yml -f suites=release_test -f build_args="PRECICE_REF:150d4ee,OPENFOAM_ADAPTER_REF:a0e5263,PYTHON_BINDINGS_REF:49c2af0,FENICS_ADAPTER_REF:6f99859,TUTORIALS_REF:a1d46c4" --ref=develop
+    gh workflow run run_testsuite_manual.yml -f suites=release_test -f build_args="PRECICE_REF:v3.1.1,OPENFOAM_ADAPTER_REF:v1.3.0,PYTHON_BINDINGS_REF:v3.1.0,FENICS_ADAPTER_REF:v2.1.0,SU2_VERSION:7.5.1,SU2_ADAPTER_REF:64d4aff,TUTORIALS_REF:340b447" --ref=develop
     ```
 
 4. Go to the tutorials [Actions](https://github.com/precice/tutorials/actions) page and find the running workflow
@@ -61,7 +61,7 @@ gh workflow run run_testsuite_manual.yml -f suites=fenics_test --ref=develop
 Another example, to use the latest releases and enable debug information of the tests:
 
 ```shell
-gh workflow run run_testsuite_manual.yml -f suites=fenics_test -f build_args="PRECICE_REF:v3.1.1,OPENFOAM_ADAPTER_REF:v1.3.0,PYTHON_BINDINGS_REF:v3.1.0,FENICS_ADAPTER_REF:v2.1.0" -f loglevel=DEBUG --ref=develop
+gh workflow run run_testsuite_manual.yml -f suites=fenics_test -f build_args="PRECICE_REF:v3.1.1,OPENFOAM_ADAPTER_REF:v1.3.0,PYTHON_BINDINGS_REF:v3.1.0,FENICS_ADAPTER_REF:v2.1.0,SU2_VERSION:7.5.1,SU2_ADAPTER_REF:64d4aff,TUTORIALS_REF:340b447" -f loglevel=DEBUG --ref=develop
 ```
 
 where the `*_REF` should be a specific [commit-ish](https://git-scm.com/docs/gitglossary#Documentation/gitglossary.txt-aiddefcommit-ishacommit-ishalsocommittish).
@@ -286,7 +286,7 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  {{ run }} | tee {{ case_folder }}.log 2>&1"
+  {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"
 ```
 
 This template defines:

tools/tests/component-templates/bare.yaml

@@ -13,4 +13,4 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  {{ run }} | tee {{ case_folder }}.log 2>&1"
+  {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/component-templates/calculix-adapter.yaml

@@ -13,4 +13,4 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  {{ run }} | tee {{ case_folder }}.log 2>&1"
+  {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/component-templates/fenics-adapter.yaml

@@ -13,4 +13,4 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  {{ run }} | tee {{ case_folder }}.log 2>&1"
+  {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/component-templates/nutils-adapter.yaml

@@ -13,4 +13,4 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  {{ run }} | tee {{ case_folder }}.log 2>&1"
+  {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/component-templates/openfoam-adapter.yaml

@@ -13,4 +13,4 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  openfoam {{ run }} | tee {{ case_folder }}.log 2>&1"
+  openfoam {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/component-templates/python-bindings.yaml

@@ -13,4 +13,4 @@ volumes:
 command: >
   /bin/bash -c "id && 
   cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
-  {{ run }} | tee {{ case_folder }}.log 2>&1"
+  {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/component-templates/su2-adapter.yaml

@@ -0,0 +1,16 @@
+build: 
+  context: {{ dockerfile_context }}
+  args:
+    {% for key, value in build_arguments.items() %}
+      - {{key}}={{value}}
+    {% endfor %}
+  target: su2_adapter
+depends_on:    
+  prepare:
+    condition: service_completed_successfully
+volumes:
+  - {{ run_directory }}:/runs
+command: >
+  /bin/bash -c "id && 
+  cd '/runs/{{ tutorial_folder }}/{{ case_folder }}' &&
+  SU2_RUN="/home/precice/SU2_RUN/bin" PYTHONPATH="/home/precice/SU2_RUN/bin:$PYTHONPATH" {{ run }} | tee system-tests_{{ case_folder }}.log 2>&1"

tools/tests/components.yaml

@@ -107,3 +107,23 @@ calculix-adapter:
     CALULIX_ADAPTER_REF:
       description: Version of Calculix-Adapter to use
       default: "master"
+
+su2-adapter:
+  repository: https://github.com/precice/su2-adapter
+  template: component-templates/su2-adapter.yaml
+  build_arguments:
+    PRECICE_REF:
+      description: Version of preCICE to use
+      default: "main"
+    PLATFORM:
+      description: Dockerfile platform used
+      default: "ubuntu_2204"
+    TUTORIALS_REF:
+      description: Tutorial git reference to use
+      default: "master"
+    SU2_VERSION:
+      description: Version of SU2 to use
+      default: "7.5.1"
+    SU2_ADAPTER_REF:
+      description: Version of SU2-Adapter to use
+      default: "master"

tools/tests/dockerfiles/ubuntu_2204/Dockerfile

@@ -126,3 +126,31 @@ RUN git clone https://github.com/precice/calculix-adapter.git && \
     git checkout ${CALULIX_ADAPTER_REF} &&\
     make CXX_VERSION=${CALULIX_VERSION} ADDITIONAL_FFLAGS="-fallow-argument-mismatch" -j $(nproc) && \
     ln -s /home/precice/calculix-adapter/bin/ccx_preCICE /home/precice/.local/bin/ccx_preCICE
+
+FROM python_bindings as su2_adapter
+COPY --from=precice /home/precice/.local /home/precice/.local
+USER root
+RUN apt-get -qq update && \
+    apt-get -qq install swig
+ARG SU2_VERSION
+USER precice
+
+# Download and build SU2 (We could also use pre-built binaries from the SU2 releases)
+WORKDIR /home/precice
+RUN wget https://github.com/su2code/SU2/archive/refs/tags/v${SU2_VERSION}.tar.gz && \
+    tar xvzf v${SU2_VERSION}.tar.gz && \
+    rm -fv v${SU2_VERSION}.tar.gz
+RUN pip3 install --user mpi4py
+ARG SU2_ADAPTER_REF
+WORKDIR /home/precice
+ENV SU2_RUN="/home/precice/SU2_RUN" 
+ENV SU2_HOME="/home/precice/SU2-${SU2_VERSION}"
+ENV PATH="/home/precice/su2-adapter/run:$SU2_RUN:$PATH"
+ENV PYTHONPATH="$SU2_RUN:$PYTHONPATH"
+RUN git clone https://github.com/precice/su2-adapter.git && \
+    cd su2-adapter &&\
+    git checkout ${SU2_ADAPTER_REF} &&\
+    ./su2AdapterInstall
+RUN cd "${SU2_HOME}" &&\
+    ./meson.py build -Denable-pywrapper=true --prefix=$SU2_RUN &&\
+    ./ninja -C build install

tools/tests/reference_versions.yaml

@@ -7,3 +7,5 @@ TUTORIALS_REF: "340b447" # April 12, 2024, just before v202404.0
 PLATFORM: "ubuntu_2204"
 CALULIX_VERSION: "2.20"
 CALULIX_ADAPTER_REF: "v2.20.1"
+SU2_VERSION: "7.5.1"
+SU2_ADAPTER_REF: "64d4aff" # Distribution v2404

tools/tests/systemtests/Systemtest.py

@@ -19,7 +19,7 @@
 import os
 
 
-GLOBAL_TIMEOUT = 360
+GLOBAL_TIMEOUT = 600
 SHORT_TIMEOUT = 10
 
 

tools/tests/tests.yaml

@@ -39,6 +39,13 @@ test_suites:
           - fluid-openfoam
           - solid-calculix
         reference_result: ./perpendicular-flap/reference-results/fluid-openfoam_solid-calculix.tar.gz
+  su2_test:
+    tutorials:
+      - path: perpendicular-flap
+        case_combination:
+          - fluid-su2
+          - solid-fenics
+        reference_result: ./perpendicular-flap/reference-results/fluid-su2_solid-fenics.tar.gz
   elastic_tube_1d_test:
     tutorials:
       - path: elastic-tube-1d
@@ -78,3 +85,13 @@ test_suites:
           - fluid-openfoam
           - solid-openfoam
         reference_result: ./flow-over-heated-plate/reference-results/fluid-openfoam_solid-openfoam.tar.gz
+      - path: perpendicular-flap
+        case_combination:
+          - fluid-openfoam
+          - solid-calculix
+        reference_result: ./perpendicular-flap/reference-results/fluid-openfoam_solid-calculix.tar.gz
+      - path: perpendicular-flap
+        case_combination:
+          - fluid-su2
+          - solid-fenics
+        reference_result: ./perpendicular-flap/reference-results/fluid-su2_solid-fenics.tar.gz