Fix #6171

news/6171.bugfix.rst

@@ -0,0 +1 @@
+Fixed package sorting when installing a package with extras.

pipenv/project.py

@@ -15,6 +15,7 @@
 from urllib.parse import unquote, urljoin
 
 from pipenv.utils.constants import VCS_LIST
+from pipenv.vendor.tomlkit.items import SingleKey, Table
 
 try:
     import tomllib as toml
@@ -1107,12 +1108,23 @@ def get_package_name_in_pipfile(self, package_name, category):
                 return name
         return None
 
-    def _sort_category(self, category):
-        # toml tables won't maintain sorted dictionary order
-        # so construct the table in the order that we need
+    def _sort_category(self, category) -> Table:
+        # copy table or create table from dict-like object
         table = tomlkit.table()
-        for key, value in sorted(category.items()):
-            table.add(key, value)
+        if isinstance(category, Table):
+            table.update(category.value)
+        else:
+            table.update(category)
+
+        # sort the table internally
+        table._value._body.sort(key=lambda t: t[0] and t[0].key or "")
+        for index, (key, _) in enumerate(table._value._body):
+            assert isinstance(key, SingleKey)
+            indices = table._value._map[key]
+            if isinstance(indices, tuple):
+                table._value._map[key] = (index,) + indices[1:]
+            else:
+                table._value._map[key] = index
 
         return table
 

pipenv/utils/toml.py

@@ -1,8 +1,9 @@
 from typing import Union
 
 from pipenv.vendor.plette.models import Package, PackageCollection
-from pipenv.vendor.tomlkit.container import Container
+from pipenv.vendor.tomlkit.container import Container, OutOfOrderTableProxy
 from pipenv.vendor.tomlkit.items import AoT, Array, Bool, InlineTable, Item, String, Table
+from pipenv.vendor.tomlkit.toml_document import TOMLDocument
 
 try:
     import tomllib as toml
@@ -33,26 +34,32 @@ def cleanup_toml(tml):
     return toml
 
 
-def convert_toml_outline_tables(parsed, project):
+def convert_toml_outline_tables(parsed: TOMLDocument, project) -> TOMLDocument:
     """Converts all outline tables to inline tables."""
 
     def convert_tomlkit_table(section):
-        result = section.copy()
-        if isinstance(section, tomlkit.items.Table):
+        result: Table = tomlkit.table()
+        if isinstance(section, Table):
             body = section.value._body
-        elif isinstance(section, tomlkit.container.OutOfOrderTableProxy):
+        elif isinstance(section, OutOfOrderTableProxy):
             body = section._internal_container._body
         else:
-            body = section._body
+            assert not hasattr(section, "_body")
+            body = section
+
+        index: int = 0
         for key, value in body:
             if not key:
                 continue
-            if hasattr(value, "keys") and not isinstance(
-                value, tomlkit.items.InlineTable
-            ):
+            if hasattr(value, "keys") and not isinstance(value, InlineTable):
                 table = tomlkit.inline_table()
                 table.update(value.value)
-                result[key.key] = table
+                key.sep = " = "  # add separator because it did not exist before
+                result.append(key, table)
+            else:
+                result.append(key, value)
+            index += 1
+
         return result
 
     def convert_toml_table(section):
@@ -66,10 +73,10 @@ def convert_toml_table(section):
                 result[package] = table
         return result
 
-    is_tomlkit_parsed = isinstance(parsed, tomlkit.container.Container)
+    is_tomlkit_parsed = isinstance(parsed, Container)
     for section in project.get_package_categories():
         table_data = parsed.get(section, {})
-        if not table_data:
+        if table_data is None:
             continue
         if is_tomlkit_parsed:
             result = convert_tomlkit_table(table_data)

tests/conftest.py

@@ -4,4 +4,5 @@
 @pytest.fixture()
 def project():
     from pipenv.project import Project
+
     return Project()

tests/fixtures/cython-import-package/setup.py

@@ -10,34 +10,31 @@
 import Cython.Distutils
 
 
-
 ROOT = os.path.dirname(__file__)
 
-PACKAGE_NAME = 'cython_import_package'
+PACKAGE_NAME = "cython_import_package"
 
 VERSION = None
 
-with open(os.path.join(ROOT, 'src', PACKAGE_NAME.replace("-", "_"), '__init__.py')) as f:
+with open(os.path.join(ROOT, "src", PACKAGE_NAME.replace("-", "_"), "__init__.py")) as f:
     for line in f:
-        if line.startswith('__version__ = '):
-            VERSION = ast.literal_eval(line[len('__version__ = '):].strip())
+        if line.startswith("__version__ = "):
+            VERSION = ast.literal_eval(line[len("__version__ = ") :].strip())
             break
 if VERSION is None:
-    raise OSError('failed to read version')
+    raise OSError("failed to read version")
 
 
 # Put everything in setup.cfg, except those that don't actually work?
 setup(
     # These really don't work.
-    package_dir={'': 'src'},
-    packages=find_packages('src'),
-
+    package_dir={"": "src"},
+    packages=find_packages("src"),
     # I don't know how to specify an empty key in setup.cfg.
     package_data={
-        '': ['LICENSE*', 'README*'],
+        "": ["LICENSE*", "README*"],
     },
     setup_requires=["setuptools_scm", "cython"],
-
     # I need this to be dynamic.
     version=VERSION,
 )

tests/fixtures/fake-package/docs/conf.py

@@ -13,21 +13,22 @@
 #
 import os
 import sys
+
 ROOT = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
 PACKAGE_DIR = os.path.join(ROOT, "src/fake_package")
 sys.path.insert(0, PACKAGE_DIR)
 
 
 # -- Project information -----------------------------------------------------
 
-project = 'fake_package'
-copyright = '2019, Dan Ryan <[email protected]>'
-author = 'Dan Ryan <[email protected]>'
+project = "fake_package"
+copyright = "2019, Dan Ryan <[email protected]>"
+author = "Dan Ryan <[email protected]>"
 
 # The short X.Y version
-version = '0.0'
+version = "0.0"
 # The full version, including alpha/beta/rc tags
-release = '0.0.0.dev0'
+release = "0.0.0.dev0"
 
 
 # -- General configuration ---------------------------------------------------
@@ -40,39 +41,39 @@
 # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
 # ones.
 extensions = [
-    'sphinx.ext.autodoc',
-    'sphinx.ext.viewcode',
-    'sphinx.ext.todo',
-    'sphinx.ext.intersphinx',
-    'sphinx.ext.autosummary'
+    "sphinx.ext.autodoc",
+    "sphinx.ext.viewcode",
+    "sphinx.ext.todo",
+    "sphinx.ext.intersphinx",
+    "sphinx.ext.autosummary",
 ]
 
 # Add any paths that contain templates here, relative to this directory.
-templates_path = ['_templates']
+templates_path = ["_templates"]
 
 # The suffix(es) of source filenames.
 # You can specify multiple suffix as a list of string:
 #
 # source_suffix = ['.rst', '.md']
-source_suffix = '.rst'
+source_suffix = ".rst"
 
 # The master toctree document.
-master_doc = 'index'
+master_doc = "index"
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.
 #
 # This is also used if you do content translation via gettext catalogs.
 # Usually you set "language" from the command line for these cases.
-language = 'en'
+language = "en"
 
 # List of patterns, relative to source directory, that match files and
 # directories to ignore when looking for source files.
 # This pattern also affects html_static_path and html_extra_path .
-exclude_patterns = ['_build', '_man', 'Thumbs.db', '.DS_Store']
+exclude_patterns = ["_build", "_man", "Thumbs.db", ".DS_Store"]
 
 # The name of the Pygments (syntax highlighting) style to use.
-pygments_style = 'sphinx'
+pygments_style = "sphinx"
 autosummary_generate = True
 
 
@@ -81,7 +82,7 @@
 # The theme to use for HTML and HTML Help pages.  See the documentation for
 # a list of builtin themes.
 #
-html_theme = 'sphinx_rtd_theme'
+html_theme = "sphinx_rtd_theme"
 
 # Theme options are theme-specific and customize the look and feel of a theme
 # further.  For a list of options available for each theme, see the
@@ -92,7 +93,7 @@
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
-html_static_path = ['_static']
+html_static_path = ["_static"]
 
 # Custom sidebar templates, must be a dictionary that maps document names
 # to template names.
@@ -108,22 +109,22 @@
 # -- Options for HTMLHelp output ---------------------------------------------
 
 # Output file base name for HTML help builder.
-htmlhelp_basename = 'fake_packagedoc'
+htmlhelp_basename = "fake_packagedoc"
 extlinks = {
-    'issue': ('https://github.com/sarugaku/fake_package/issues/%s', '#'),
-    'pull': ('https://github.com/sarugaku/fake_package/pull/%s', 'PR #'),
+    "issue": ("https://github.com/sarugaku/fake_package/issues/%s", "#"),
+    "pull": ("https://github.com/sarugaku/fake_package/pull/%s", "PR #"),
 }
 html_theme_options = {
-    'display_version': True,
-    'prev_next_buttons_location': 'bottom',
-    'style_external_links': True,
-    'vcs_pageview_mode': '',
+    "display_version": True,
+    "prev_next_buttons_location": "bottom",
+    "style_external_links": True,
+    "vcs_pageview_mode": "",
     # Toc options
-    'collapse_navigation': True,
-    'sticky_navigation': True,
-    'navigation_depth': 4,
-    'includehidden': True,
-    'titles_only': False
+    "collapse_navigation": True,
+    "sticky_navigation": True,
+    "navigation_depth": 4,
+    "includehidden": True,
+    "titles_only": False,
 }
 
 # -- Options for LaTeX output ------------------------------------------------
@@ -132,15 +133,12 @@
     # The paper size ('letterpaper' or 'a4paper').
     #
     # 'papersize': 'letterpaper',
-
     # The font size ('10pt', '11pt' or '12pt').
     #
     # 'pointsize': '10pt',
-
     # Additional stuff for the LaTeX preamble.
     #
     # 'preamble': '',
-
     # Latex figure (float) alignment
     #
     # 'figure_align': 'htbp',
@@ -150,19 +148,21 @@
 # (source start file, target name, title,
 #  author, documentclass [howto, manual, or own class]).
 latex_documents = [
-    (master_doc, 'fake_package.tex', 'fake_package Documentation',
-     'Dan Ryan \\textless{}[email protected]\\textgreater{}', 'manual'),
+    (
+        master_doc,
+        "fake_package.tex",
+        "fake_package Documentation",
+        "Dan Ryan \\textless{}[email protected]\\textgreater{}",
+        "manual",
+    ),
 ]
 
 
 # -- Options for manual page output ------------------------------------------
 
 # One entry per manual page. List of tuples
 # (source start file, name, description, authors, manual section).
-man_pages = [
-    (master_doc, 'fake_package', 'fake_package Documentation',
-     [author], 1)
-]
+man_pages = [(master_doc, "fake_package", "fake_package Documentation", [author], 1)]
 
 
 # -- Options for Texinfo output ----------------------------------------------
@@ -171,9 +171,15 @@
 # (source start file, target name, title, author,
 #  dir menu entry, description, category)
 texinfo_documents = [
-    (master_doc, 'fake_package', 'fake_package Documentation',
-     author, 'fake_package', 'A fake python package.',
-     'Miscellaneous'),
+    (
+        master_doc,
+        "fake_package",
+        "fake_package Documentation",
+        author,
+        "fake_package",
+        "A fake python package.",
+        "Miscellaneous",
+    ),
 ]
 
 
@@ -195,7 +201,7 @@
 # epub_uid = ''
 
 # A list of files that should not be packed into the epub file.
-epub_exclude_files = ['search.html']
+epub_exclude_files = ["search.html"]
 
 
 # -- Extension configuration -------------------------------------------------
@@ -204,4 +210,4 @@
 
 # If true, `todo` and `todoList` produce output, else they produce nothing.
 todo_include_todos = True
-intersphinx_mapping = {'python': ('https://docs.python.org/3', None)}
+intersphinx_mapping = {"python": ("https://docs.python.org/3", None)}