Merge pull request #65 from DittmarLab/2.0b2

matplotlib agg backend switch
qiyunlab · Dec 27, 2020 · 438c2a8 · 438c2a8
2 parents 329193c + 20b5cf2
commit 438c2a8
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/hgtector/analyze.py b/hgtector/analyze.py
@@ -24,8 +24,6 @@
 from sklearn.model_selection import GridSearchCV
 from sklearn.metrics import silhouette_samples
 
-import matplotlib
-matplotlib.use('Agg')
 import matplotlib.pyplot as plt
 
 from hgtector.util import (
@@ -35,6 +33,8 @@
     taxid_at_rank, get_descendants, save_figure)
 
 
+plt.switch_backend('agg')
+
 description = """predict HGT events based on search results"""
 
 arguments = [