Fix quarkus-picocli tests with native mode #4690

Workflow file for this run

	name: "Pull Request CI"
	on:
	- pull_request
	jobs:
	detect-test-suite-modules:
	name: Detect Modules in PR
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	with:
	repository: ${{ github.event.pull_request.head.repo.full_name }}
	- id: fetch-latest-target-branch-commits # makes sure that latest target branch HEAD commit is available locally
	# fetching the latest 2 commits, one should be enough but 2 could avoid race (diff between GH PR event base sha and actual remote base sha)
	name: 'Fetch the latest 2 target (base) branch commits'
	run: \|
	git remote add quarkus_qe_target_repo https://github.com/quarkus-qe/quarkus-test-suite.git
	git fetch quarkus_qe_target_repo ${GITHUB_BASE_REF} --depth=2
	- id: files
	uses: tj-actions/changed-files@v45
	continue-on-error: true
	- id: detect-changes
	run: \|
	MODULES=$(find -name pom.xml \| sed -e 's\|pom.xml\| \|' \| sed -e 's\|./\| \|' \| grep -v " quarkus/" \| grep -v resources)
	CHANGED=""
	MODULES_ARG=""

	# If changed file have some special character, its path is surrounded with quotes which causing the if statement fail
	CHANGED_FILE=$(echo ${{ steps.files.outputs.all_changed_and_modified_files }} \| sed 's/\"/\\"/')

	for module in $MODULES
	do
	if [[ $CHANGED_FILE =~ ("$module") ]] ; then
	CHANGED=$(echo $CHANGED" "$module)
	fi
	done

	# trim leading spaces so that module args don't start with comma
	CHANGED="$(echo $CHANGED \| xargs)"

	MODULES_ARG="${CHANGED// /,}"
	echo "MODULES_ARG=$MODULES_ARG" >> $GITHUB_OUTPUT
	outputs:
	MODULES_ARG: ${{ steps.detect-changes.outputs.MODULES_ARG }}
	prepare-jvm-native-latest-modules-mvn-param:
	name: Prepare Maven Params For Linux JVM and native Build
	runs-on: ubuntu-latest
	needs: detect-test-suite-modules
	env:
	MODULES_ARG: ${{ needs.detect-test-suite-modules.outputs.MODULES_ARG }}
	steps:
	- id: prepare-modules-mvn-param
	run: \|
	if [[ -n ${MODULES_ARG} ]]; then
	echo "Running modules: ${MODULES_ARG}"
	echo "JVM_MODULES_MAVEN_PARAM=[\" -pl ${MODULES_ARG} -Dall-modules\"]" >> $GITHUB_OUTPUT
	echo "NATIVE_MODULES_MAVEN_PARAM=[\" -pl ${MODULES_ARG} -Dall-modules\"]" >> $GITHUB_OUTPUT
	else
	echo "JVM_MODULES_MAVEN_PARAM=[' -P root-modules,cache-modules,spring-modules,http-modules,test-tooling-modules,messaging-modules,monitoring-modules', ' -P security-modules,sql-db-modules,websockets-modules,nosql-db-modules']" >> $GITHUB_OUTPUT
	echo "NATIVE_MODULES_MAVEN_PARAM=[' -P root-modules,websockets-modules,test-tooling-modules,nosql-db-modules', ' -P http-modules,cache-modules', ' -P security-modules,spring-modules',
	' -P sql-db-modules -pl env-info,sql-db/hibernate,sql-db/sql-app,sql-db/sql-app-compatibility,sql-db/multiple-pus,sql-db/panache-flyway,sql-db/hibernate-reactive',
	' -P sql-db-modules -pl env-info,sql-db/reactive-rest-data-panache,sql-db/vertx-sql,sql-db/reactive-vanilla,sql-db/hibernate-fulltext-search,sql-db/narayana-transactions',
	' -P messaging-modules,monitoring-modules']" \| tr -d -s '\n' ' ' >> $GITHUB_OUTPUT
	fi
	outputs:
	JVM_MODULES_MAVEN_PARAM: ${{ steps.prepare-modules-mvn-param.outputs.JVM_MODULES_MAVEN_PARAM }}
	NATIVE_MODULES_MAVEN_PARAM: ${{ steps.prepare-modules-mvn-param.outputs.NATIVE_MODULES_MAVEN_PARAM }}
	build-dependencies:
	name: Build Dependencies
	runs-on: ubuntu-latest
	needs: prepare-jvm-native-latest-modules-mvn-param
	strategy:
	matrix:
	java: [ 17 ]
	steps:
	- uses: actions/checkout@v4
	- name: Reclaim Disk Space
	run: .github/ci-prerequisites.sh
	- name: Install required tools
	run: sudo apt update && sudo apt install pigz
	- name: Install JDK {{ matrix.java }}
	uses: actions/setup-java@v4
	with:
	distribution: 'temurin'
	java-version: ${{ matrix.java }}
	check-latest: true
	- name: Build Quarkus main
	run: \|
	git clone https://github.com/quarkusio/quarkus.git && cd quarkus && ./mvnw -B --no-transfer-progress -s .github/mvn-settings.xml clean install -Dquickly -Dno-test-modules -Prelocations
	- name: Tar Maven Repo
	shell: bash
	run: tar -I 'pigz -9' -cf maven-repo.tgz -C ~ .m2/repository
	- name: Persist Maven Repo
	uses: actions/upload-artifact@v4
	with:
	name: maven-repo
	path: maven-repo.tgz
	retention-days: 1
	linux-validate-format:
	name: Linux - Validate format
	runs-on: ubuntu-latest
	needs: build-dependencies
	strategy:
	matrix:
	java: [ 17 ]
	steps:
	- uses: actions/checkout@v4
	- name: Install JDK {{ matrix.java }}
	uses: actions/setup-java@v4
	with:
	distribution: 'temurin'
	java-version: ${{ matrix.java }}
	check-latest: true
	- name: Download Maven Repo
	uses: actions/download-artifact@v4
	with:
	name: maven-repo
	path: .
	- name: Extract Maven Repo
	shell: bash
	run: tar -xzf maven-repo.tgz -C ~
	- name: Build with Maven
	run: \|
	mvn -V -B --no-transfer-progress -s .github/mvn-settings.xml verify -Dall-modules -Dvalidate-format -DskipTests -DskipITs -Dquarkus.container-image.build=false -Dquarkus.container-image.push=false
	linux-build-jvm-latest:
	name: PR - Linux - JVM build - Latest Version
	runs-on: ubuntu-latest
	timeout-minutes: 240
	needs: [linux-validate-format, prepare-jvm-native-latest-modules-mvn-param]
	strategy:
	matrix:
	java: [ 17 ]
	module-mvn-args: ${{ fromJSON(needs.prepare-jvm-native-latest-modules-mvn-param.outputs.JVM_MODULES_MAVEN_PARAM) }}
	outputs:
	has-flaky-tests: ${{steps.flaky-test-detector.outputs.has-flaky-tests}}
	steps:
	- uses: actions/checkout@v4
	- name: Reclaim Disk Space
	run: .github/ci-prerequisites.sh
	- name: Install JDK {{ matrix.java }}
	# Uses sha for added security since tags can be updated
	uses: actions/setup-java@v4
	with:
	distribution: 'temurin'
	java-version: ${{ matrix.java }}
	check-latest: true
	cache: 'maven'
	- name: Download Maven Repo
	uses: actions/download-artifact@v4
	with:
	name: maven-repo
	path: .
	- name: Extract Maven Repo
	shell: bash
	run: tar -xzf maven-repo.tgz -C ~
	- name: Install Quarkus CLI
	run: \|
	cat <<EOF > ./quarkus-dev-cli
	#!/bin/bash
	java -jar ~/.m2/repository/io/quarkus/quarkus-cli/999-SNAPSHOT/quarkus-cli-999-SNAPSHOT-runner.jar "\$@"
	EOF
	chmod +x ./quarkus-dev-cli
	./quarkus-dev-cli version
	- name: Build with Maven
	run: \|
	mvn -fae -V -B --no-transfer-progress -s .github/mvn-settings.xml clean verify -Dinclude.quarkus-cli-tests -Dts.quarkus.cli.cmd="${PWD}/quarkus-dev-cli"${{ matrix.module-mvn-args }} -am -DexcludedGroups=long-running
	- name: Detect flaky tests
	id: flaky-test-detector
	if: ${{ hashFiles('**/flaky-run-report.json') != '' }}
	run: echo "has-flaky-tests=true" >> "$GITHUB_OUTPUT"
	- name: Rename flaky test run report to avoid file name conflicts
	id: rename-flaky-test-run-report
	if: ${{ hashFiles('**/flaky-run-report.json') != '' }}
	shell: bash
	run: mv target/flaky-run-report.json target/flaky-run-report-linux-jvm-latest.json
	- name: Archive flaky run report
	id: archive-flaky-run-report
	if: ${{ hashFiles('**/flaky-run-report-linux-jvm-latest.json') != '' }}
	uses: actions/upload-artifact@v4
	with:
	name: flaky-run-report-linux-jvm-latest
	path: target/flaky-run-report-linux-jvm-latest.json
	- name: Zip Artifacts
	if: failure()
	run: \|
	zip -R artifacts-latest-linux-jvm${{ matrix.java }}.zip '-reports/'
	- uses: actions/upload-artifact@v4
	if: failure()
	with:
	name: artifacts-latest-linux-jvm${{ matrix.java }}
	path: artifacts-latest-linux-jvm${{ matrix.java }}.zip
	linux-build-native-latest:
	name: PR - Linux - Native build - Latest Version
	runs-on: ubuntu-latest
	needs: [linux-validate-format, prepare-jvm-native-latest-modules-mvn-param]
	strategy:
	matrix:
	java: [ 17 ]
	module-mvn-args: ${{ fromJSON(needs.prepare-jvm-native-latest-modules-mvn-param.outputs.NATIVE_MODULES_MAVEN_PARAM) }}
	outputs:
	has-flaky-tests: ${{steps.flaky-test-detector.outputs.has-flaky-tests}}
	steps:
	- uses: actions/checkout@v4
	- name: Reclaim Disk Space
	run: .github/ci-prerequisites.sh
	- name: Install JDK {{ matrix.java }}
	# Uses sha for added security since tags can be updated
	uses: actions/setup-java@v4
	with:
	distribution: 'temurin'
	java-version: ${{ matrix.java }}
	check-latest: true
	cache: 'maven'
	- name: Download Maven Repo
	uses: actions/download-artifact@v4
	with:
	name: maven-repo
	path: .
	- name: Extract Maven Repo
	shell: bash
	run: tar -xzf maven-repo.tgz -C ~
	- name: Install Quarkus CLI
	run: \|
	cat <<EOF > ./quarkus-dev-cli
	#!/bin/bash
	java -jar ~/.m2/repository/io/quarkus/quarkus-cli/999-SNAPSHOT/quarkus-cli-999-SNAPSHOT-runner.jar "\$@"
	EOF
	chmod +x ./quarkus-dev-cli
	./quarkus-dev-cli version
	- name: Build with Maven
	run: \|
	mvn -fae -V -B --no-transfer-progress -s .github/mvn-settings.xml -fae \
	-Dquarkus.native.native-image-xmx=5g \
	-Dinclude.quarkus-cli-tests -Dts.quarkus.cli.cmd="${PWD}/quarkus-dev-cli" \
	${{ matrix.module-mvn-args }} clean verify -Dnative -am -DexcludedGroups=long-running
	- name: Detect flaky tests
	id: flaky-test-detector
	if: ${{ hashFiles('**/flaky-run-report.json') != '' }}
	run: echo "has-flaky-tests=true" >> "$GITHUB_OUTPUT"
	- name: Rename flaky test run report to avoid file name conflicts
	id: rename-flaky-test-run-report
	if: ${{ hashFiles('**/flaky-run-report.json') != '' }}
	shell: bash
	run: mv target/flaky-run-report.json target/flaky-run-report-linux-native-latest.json
	- name: Archive flaky run report
	id: archive-flaky-run-report
	if: ${{ hashFiles('**/flaky-run-report-linux-native-latest.json') != '' }}
	uses: actions/upload-artifact@v4
	with:
	name: flaky-run-report-linux-native-latest
	path: target/flaky-run-report-linux-native-latest.json
	- name: Zip Artifacts
	if: failure()
	run: \|
	zip -R artifacts-latest-linux-native${{ matrix.java }}.zip '-reports/'
	- uses: actions/upload-artifact@v4
	if: failure()
	with:
	name: artifacts-latest-linux-native${{ matrix.java }}
	path: artifacts-latest-linux-native${{ matrix.java }}.zip
	windows-build-jvm-latest:
	name: PR - Windows - JVM build - Latest Version
	runs-on: windows-latest
	needs: [detect-test-suite-modules, linux-validate-format]
	env:
	MODULES_ARG: ${{ needs.detect-test-suite-modules.outputs.MODULES_ARG }}
	strategy:
	matrix:
	java: [ 17 ]
	outputs:
	has-flaky-tests: ${{steps.flaky-test-detector.outputs.has-flaky-tests}}
	steps:
	- uses: actions/checkout@v4
	- name: Install JDK {{ matrix.java }}
	uses: actions/setup-java@v4
	with:
	distribution: 'temurin'
	java-version: ${{ matrix.java }}
	check-latest: true
	cache: 'maven'
	- name: Download Maven Repo
	uses: actions/download-artifact@v4
	with:
	name: maven-repo
	path: .
	- name: Extract Maven Repo
	shell: bash
	run: tar -xzf maven-repo.tgz -C ~
	- name: Build in JVM mode
	shell: bash
	run: \|
	MODULES_MAVEN_PARAM=""
	if [[ -n ${MODULES_ARG} ]]; then
	echo "Running modules: ${MODULES_ARG}"
	MODULES_MAVEN_PARAM="-pl ${MODULES_ARG}"
	fi

	mvn -B --no-transfer-progress -fae -s .github/mvn-settings.xml clean verify -Dall-modules $MODULES_MAVEN_PARAM -am -DexcludedGroups=long-running
	- name: Detect flaky tests
	id: flaky-test-detector
	if: ${{ hashFiles('**/flaky-run-report.json') != '' }}
	shell: bash
	run: echo "has-flaky-tests=true" >> "$GITHUB_OUTPUT"
	- name: Rename flaky test run report to avoid file name conflicts
	id: rename-flaky-test-run-report
	if: ${{ hashFiles('**/flaky-run-report.json') != '' }}
	shell: bash
	run: mv target/flaky-run-report.json target/flaky-run-report-windows-jvm-latest.json
	- name: Archive flaky run report
	id: archive-flaky-run-report
	if: ${{ hashFiles('**/flaky-run-report-windows-jvm-latest.json') != '' }}
	uses: actions/upload-artifact@v4
	with:
	name: flaky-run-report-windows-jvm-latest
	path: target/flaky-run-report-windows-jvm-latest.json
	- name: Zip Artifacts
	shell: bash
	if: failure()
	run: \|
	# Disambiguate windows find from cygwin find
	/usr/bin/find . -name '-reports/' -type d \| tar -czf artifacts-latest-windows-jvm${{ matrix.java }}.tar -T -
	- name: Archive artifacts
	if: failure()
	uses: actions/upload-artifact@v4
	with:
	name: artifacts-latest-windows-jvm${{ matrix.java }}
	path: artifacts-latest-windows-jvm${{ matrix.java }}.tar
	detect-flaky-tests:
	name: Detect flaky tests
	runs-on: ubuntu-latest
	needs: [linux-build-jvm-latest, linux-build-native-latest, windows-build-jvm-latest]
	steps:
	- name: Create file with information about job with flaky test
	if: needs.linux-build-jvm-latest.outputs.has-flaky-tests == 'true' \|\| needs.linux-build-native-latest.outputs.has-flaky-tests == 'true' \|\| needs.windows-build-jvm-latest.outputs.has-flaky-tests == 'true'
	run: \|
	job_name=""
	if $IS_LINUX_JVM
	then
	job_name+=", 'PR - Linux - JVM build - Latest Version'"
	fi
	if $IS_LINUX_NATIVE
	then
	job_name+=", 'PR - Linux - Native build - Latest Version'"
	fi
	if $IS_WINDOWS_JVM
	then
	job_name+=", 'PR - Windows - JVM build - Latest Version'"
	fi
	echo "${job_name:2}" > jobs-with-flaky-tests
	env:
	IS_LINUX_JVM: ${{ needs.linux-build-jvm-latest.outputs.has-flaky-tests == 'true' }}
	IS_LINUX_NATIVE: ${{ needs.linux-build-native-latest.outputs.has-flaky-tests == 'true' }}
	IS_WINDOWS_JVM: ${{ needs.windows-build-jvm-latest.outputs.has-flaky-tests == 'true' }}
	- name: Archive 'jobs-with-flaky-tests' artifact
	if: ${{ hashFiles('**/jobs-with-flaky-tests') != '' }}
	uses: actions/upload-artifact@v4
	with:
	name: jobs-with-flaky-tests
	path: jobs-with-flaky-tests
	- name: Save PR number
	if: ${{ hashFiles('**/jobs-with-flaky-tests') != '' }}
	env:
	PR_NUMBER: ${{ github.event.number }}
	run: echo $PR_NUMBER > pr-number
	- name: Archive PR number
	uses: actions/upload-artifact@v4
	if: ${{ hashFiles('**/jobs-with-flaky-tests') != '' }}
	with:
	name: pr-number
	path: pr-number

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Fix quarkus-picocli tests with native mode #4690

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Fix quarkus-picocli tests with native mode #4690

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Workflow file for this run