Skip to content

Commit

Permalink
Update
Browse files Browse the repository at this point in the history
  • Loading branch information
gaborcsardi committed Aug 3, 2024
1 parent 9e67449 commit 9b90053
Show file tree
Hide file tree
Showing 4 changed files with 11 additions and 12 deletions.
8 changes: 4 additions & 4 deletions cran.r-project.org/web/checks/check_flavors.html
Original file line number Diff line number Diff line change
Expand Up @@ -10,20 +10,20 @@
<div class="container">
<h2>CRAN Package Check Flavors</h2>
<p>
Last updated on 2024-08-01 04:53:06 CEST.
Last updated on 2024-08-03 04:48:05 CEST.
</p>
<p>
Systems used for CRAN package checking.
</p>
<table border="1">
<tr> <th> Flavor </th> <th> R&nbsp;Version </th> <th> OS&nbsp;Type </th> <th> CPU&nbsp;Type </th> <th> OS&nbsp;Info </th> <th> CPU&nbsp;Info </th> <th> Compilers </th> <th> LC_CTYPE </th> <th> </th> </tr>
<tr id="r-devel-linux-x86_64-debian-clang"> <td> r-devel-linux-x86_64-debian-clang </td> <td> r-devel </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> clang/flang-new version 18.1.8 </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-devel-linux-x86_64-debian-gcc"> <td> r-devel-linux-x86_64-debian-gcc </td> <td> r-devel </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> GCC 13.3.0 (Debian 13.3.0-1) </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-devel-linux-x86_64-debian-gcc"> <td> r-devel-linux-x86_64-debian-gcc </td> <td> r-devel </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> GCC 13.3.0 (Debian 13.3.0-3) </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-devel-linux-x86_64-fedora-clang"> <td> r-devel-linux-x86_64-fedora-clang </td> <td> r-devel </td> <td> Linux </td> <td> x86_64 </td> <td> Fedora 36 </td> <td> 2x 6-core Intel Xeon E5-2440 0 @ 2.40GHz </td> <td> clang/flang version 18.1.x </td> <td> en_GB.UTF-8 </td> <td> <a href="../../../www.stats.ox.ac.uk/pub/bdr/Rconfig/r-devel-linux-x86_64-fedora-clang"> Details </a> </td> </tr>
<tr id="r-devel-linux-x86_64-fedora-gcc"> <td> r-devel-linux-x86_64-fedora-gcc </td> <td> r-devel </td> <td> Linux </td> <td> x86_64 </td> <td> Fedora 36 </td> <td> 2x 6-core Intel Xeon E5-2440 0 @ 2.40GHz </td> <td> GCC 13.2 </td> <td> en_GB.UTF-8 </td> <td> <a href="../../../www.stats.ox.ac.uk/pub/bdr/Rconfig/r-devel-linux-x86_64-fedora-gcc"> Details </a> </td> </tr>
<tr id="r-devel-windows-x86_64"> <td> r-devel-windows-x86_64 </td> <td> r-devel </td> <td> Windows </td> <td> x86_64 </td> <td> Windows Server 2022 </td> <td> 2x AMD EPYC 7443 (24 cores) @ 2.85GHz </td> <td> GCC 13.2.0 (built by MXE, MinGW-W64 project) </td> <td> German_Germany.utf8 </td> <td> </td> </tr>
<tr id="r-patched-linux-x86_64"> <td> r-patched-linux-x86_64 </td> <td> r-patched </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> GCC 13.3.0 (Debian 13.3.0-1) </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-release-linux-x86_64"> <td> r-release-linux-x86_64 </td> <td> r-release </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> GCC 13.3.0 (Debian 13.3.0-1) </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-patched-linux-x86_64"> <td> r-patched-linux-x86_64 </td> <td> r-patched </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> GCC 13.3.0 (Debian 13.3.0-3) </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-release-linux-x86_64"> <td> r-release-linux-x86_64 </td> <td> r-release </td> <td> Linux </td> <td> x86_64 </td> <td> Debian GNU/Linux testing </td> <td> 2x 8-core Intel(R) Xeon(R) CPU E5-2690 0 @ 2.90GHz </td> <td> GCC 13.3.0 (Debian 13.3.0-3) </td> <td> C.UTF-8 </td> <td> </td> </tr>
<tr id="r-release-macos-arm64"> <td> r-release-macos-arm64 </td> <td> r-release </td> <td> macOS </td> <td> arm64 </td> <td> macOS 13.4 (22F66) </td> <td> Mac mini (Apple M1) </td> <td> Apple Clang 1400.0.29.202; GNU Fortran (GCC) 12.2.0 </td> <td> en_US.UTF-8 </td> <td> </td> </tr>
<tr id="r-release-macos-x86_64"> <td> r-release-macos-x86_64 </td> <td> r-release </td> <td> macOS </td> <td> x86_64 </td> <td> macOS 13.3.1 (a) (22E772610a) </td> <td> Mac mini (6-Core Intel Core i5 @ 3 GHz) </td> <td> Apple Clang 1403.0.22.14.1; GNU Fortran (GCC) 12.2.0 </td> <td> en_US.UTF-8 </td> <td> </td> </tr>
<tr id="r-release-windows-x86_64"> <td> r-release-windows-x86_64 </td> <td> r-release </td> <td> Windows </td> <td> x86_64 </td> <td> Windows Server 2022 </td> <td> 2x AMD EPYC 7443 (24 cores) @ 2.85GHz </td> <td> GCC 13.2.0 (built by MXE, MinGW-W64 project) </td> <td> German_Germany.utf8 </td> <td> </td> </tr>
Expand Down
2 changes: 1 addition & 1 deletion cran.r-project.org/web/checks/check_issue_kinds.html
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@
<div class="container">
<h2>CRAN Package Check Issue Kinds</h2>
<p>
Last updated on 2024-08-01 04:53:06 CEST.
Last updated on 2024-08-03 04:48:05 CEST.
</p>
<table border="1">
<tr> <th> Kind </th> <th> Description </th> <th> Details </th> </tr>
Expand Down
9 changes: 5 additions & 4 deletions www.stats.ox.ac.uk/pub/bdr/M1mac/README.txt
Original file line number Diff line number Diff line change
Expand Up @@ -11,10 +11,10 @@ Locale en_GB.UTF-8, LC_COLLATE=C

Details as in the R-admin manual, with config.site containing

CC="clang -mmacos-version-min=14.5"
CC="clang -mmacos-version-min=14.6"
OBJC=$CC
FC="/opt/gfortran/bin/gfortran -mtune=native"
CXX="clang++ -mmacos-version-min=14.5"
CXX="clang++ -mmacos-version-min=14.6"
CFLAGS="-falign-functions=8 -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -Wstrict-prototypes"
C17FLAGS="-falign-functions=8 -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -Wno-strict-prototypes"
C90FLAGS="-falign-functions=8 -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -Wno-strict-prototypes"
Expand All @@ -35,7 +35,7 @@ Currently this uses PROJ 9.4.1, GEOS 3.12.2, GDAL 3.9.1.

pandoc is their binary arm64 Mac build, currently 3.2.1 (and updated often).

Java is 21.0.3 from https://adoptium.net
Java is 21.0.4 from https://adoptium.net

JAGS is a binary install from
https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Mac%20OS%20X/
Expand All @@ -51,14 +51,15 @@ this may differ from the CRAN checks:
- OS and Command Line Tools are kept up-to-date (at present the CRAN
check service is running macOS 11, and Xcode/CLT 14.0.3 with the
macOS11 SDK. But R was built with CLT 14.0.0).
- The TeX installation (MacTeX, currently 2024) is updated daily.
- Later C/C++ compilers, different flags.
Apple clang 14.0.3 it seems was a major update from 14.0.0, with
many aspects of LLVM clang 15/16 having been ported.
Versions 15.0.0 seem a minor update from 14.0.3.
Versions 16.0.0 ported some changes from LLVM 19-to-be.
- External software is (mainly) kept up-to-date -- see above.
This includes using Java 21 and cmake, currently 3.29.6.
OpenMPI is installed for Rmpi, bigGP and pbdMPI, currently 5.0.1.
OpenMPI is installed for Rmpi, bigGP and pbdMPI, currently 5.0.5.
- Package INLA is installed -- requires a binary install on Macs.

Packages with non-default installs:
Expand Down
Original file line number Diff line number Diff line change
@@ -1,11 +1,9 @@
R-devel
x86_64 Fedora 36 Linux
GCC 14.1.0 (C, C++, Fortran)
GCC 14.2.0 (C, C++, Fortran)
Timezone Europe/London
Locale en_GB.UTF-8, LC_COLLATE=C

[2024-08-01: testing GCC 14.2 RC2, which reports 14.1.1 20240729.]]

configured with options --enable-lto=R, config.site:

CFLAGS="-g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes"
Expand Down

0 comments on commit 9b90053

Please sign in to comment.