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Wrap minimap2#128

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marvin-jens wants to merge 2 commits intomainrajewsky-lab/spacemake:mainfrom wrap_minimap2rajewsky-lab/spacemake:wrap_minimap2Copy head branch name to clipboard

+165-1

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Commits on Nov 18, 2024

• * add cmdline option to control total pipe_buffer usage. Limit to safe 4MB as long as we do not properly treat it as a resource

  marvin-jens

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Commits on Dec 2, 2024

• * added plumbing to integrate aligners that need FASTA/Q as input and output SAM.

  marvin-jens

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