new install_tensorflow(envname =)
default
#216
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on: | |
push: | |
branches: | |
- main | |
pull_request: | |
schedule: | |
- cron: '21 3 * * Fri' | |
name: R-CMD-check | |
defaults: | |
run: | |
shell: Rscript {0} | |
jobs: | |
R-CMD-check: | |
name: ${{ matrix.os }}, tf-${{ matrix.tf }}, R-${{ matrix.r}} | |
timeout-minutes: 30 | |
strategy: | |
fail-fast: false | |
matrix: | |
include: | |
- {os: 'ubuntu-latest' , tf: 'default', r: 'release'} | |
- {os: 'windows-latest', tf: 'default', r: 'release'} | |
- {os: 'macOS-latest' , tf: 'default', r: 'release'} | |
- {os: 'ubuntu-latest' , tf: 'default', r: 'oldrel'} | |
- {os: 'windows-latest', tf: 'default', r: 'oldrel'} | |
- {os: 'macOS-latest' , tf: 'default', r: 'oldrel'} | |
# - {os: 'ubuntu-20.04', tf: 'default', r: '3.6'} # default R in ubuntu-20.04 | |
- {os: 'ubuntu-latest', tf: 'default', r: 'oldrel-1'} | |
- {os: 'ubuntu-latest', tf: 'default', r: 'oldrel-2'} | |
- {os: 'ubuntu-latest', tf: 'default', r: 'oldrel-3'} | |
## uncomment if/when tf "release" != "default" | |
# - {os: 'ubuntu-20.04' , tf: 'release', r: 'release'} | |
# - {os: 'windows-latest', tf: 'release', r: 'release'} | |
# - {os: 'macOS-latest' , tf: 'release', r: 'release'} | |
- {os: 'ubuntu-latest', tf: '2.12', r: 'release'} | |
- {os: 'ubuntu-latest', tf: '2.11' , r: 'release'} | |
- {os: 'ubuntu-latest', tf: '2.10' , r: 'release'} | |
- {os: 'ubuntu-latest', tf: '2.9' , r: 'release'} | |
- {os: 'ubuntu-latest', tf: '2.8' , r: 'release'} | |
# these are allowed to fail | |
# - {os: 'ubuntu-20.04', tf: 'default', r: 'devel'} | |
# - {os: 'ubuntu-20.04', tf: 'nightly' , r: 'release'} | |
# - {os: 'ubuntu-20.04', tf: '2.7.0rc1', r: 'release'} | |
runs-on: ${{ matrix.os }} | |
continue-on-error: ${{ matrix.tf == 'nightly' || contains(matrix.tf, 'rc') || matrix.r == 'devel' }} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: 'true' | |
R_COMPILE_AND_INSTALL_PACKAGES: 'never' | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
id: setup-r | |
with: | |
r-version: ${{ matrix.r }} | |
Ncpus: '2L' | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- name: Get Date | |
id: get-date | |
shell: bash | |
run: | | |
echo "::set-output name=year-week::$(date -u "+%Y-%U")" | |
echo "::set-output name=date::$(date -u "+%F")" | |
- name: Restore R package cache | |
uses: actions/cache@v2 | |
id: r-package-cache | |
with: | |
path: ${{ env.R_LIBS_USER }} | |
key: ${{ matrix.os }}-${{ steps.setup-r.outputs.installed-r-version }}-${{ steps.get-date.outputs.year-week }}-1 | |
- name: Install remotes | |
if: steps.r-package-cache.outputs.cache-hit != 'true' | |
run: install.packages("remotes") | |
- name: Install system dependencies | |
if: runner.os == 'Linux' | |
shell: bash | |
run: | | |
. /etc/os-release | |
while read -r cmd | |
do | |
echo "$cmd" | |
sudo $cmd | |
done < <(Rscript -e "writeLines(remotes::system_requirements('$ID-$VERSION_ID'))") | |
- name: Install package + deps | |
run: remotes::install_local(dependencies = TRUE, force = TRUE) | |
- name: Install Miniconda | |
run: reticulate::install_miniconda() | |
- name: Install TensorFlow | |
run: tensorflow::install_tensorflow(version = '${{ matrix.tf }}-cpu') | |
- name: Install rcmdcheck | |
run: remotes::install_cran("rcmdcheck") | |
- name: Check | |
run: rcmdcheck::rcmdcheck(args = '--no-manual', error_on = 'warning', check_dir = 'check') | |
- name: Show testthat output | |
if: always() | |
shell: bash | |
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
- name: Don't use tar from old Rtools to store the cache | |
if: ${{ runner.os == 'Windows' && startsWith(steps.install-r.outputs.installed-r-version, '3') }} | |
shell: bash | |
run: echo "C:/Program Files/Git/usr/bin" >> $GITHUB_PATH |