donw with the first evaluation on Firth correction

saigegit · Mar 30, 2022 · 3fb2094 · 3fb2094
1 parent 341664a
commit 3fb2094
Showing 1 changed file with 0 additions and 3 deletions.
diff --git a/R/SAIGE_Test_main.R b/R/SAIGE_Test_main.R
@@ -215,9 +215,6 @@ SPAGMMATtest = function(bgenFile = "",
     ratioVec = Get_Variance_Ratio(varianceRatioFile, cateVarRatioMinMACVecExclude, cateVarRatioMaxMACVecInclude, isGroupTest) #readInGLMM.R
 
 
-    if(is_Firth_beta){
-	warning("Firth correction in the program is still under evaluation!!")
-    }	    
     obj.model = ReadModel(GMMATmodelFile, chrom, LOCO, is_Firth_beta) #readInGLMM.R