Merge pull request #731 from samply/release-v0.17.6

Release v0.17.6
samply · Jun 1, 2022 · d10c9b7 · d10c9b7
2 parents bda9a59 + 7070292
commit d10c9b7
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diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml
@@ -22,7 +22,7 @@ jobs:
     - name: Setup clj-kondo
       uses: DeLaGuardo/setup-clj-kondo@master
       with:
-        version: '2022.04.25'
+        version: '2022.05.31'
 
     - name: Check out Git repository
       uses: actions/checkout@v3

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,5 +1,13 @@
 # Changelog
 
+## v0.17.6
+
+### Performance
+
+* Improve Interning of Complex Types ([#725](https://github.com/samply/blaze/issues/725))
+
+The full changelog can be found [here](https://github.com/samply/blaze/milestone/44?closed=1).
+
 ## v0.17.5
 
 ### Bugfixes

diff --git a/README.md b/README.md
@@ -14,7 +14,7 @@ The goal of this project is to provide a FHIR® Store with an internal CQL Evalu
 
 Blaze passes all [Touchstone FHIR 4.0.1 Basic Tests][12] and almost all [CQL Tests][3]. Please refer to the [Conformance](docs/conformance.md) section and report any issues you encounter during evaluation.
 
-Latest release: [v0.17.5][5]
+Latest release: [v0.17.6][5]
 
 ## Quick Start
 
@@ -72,7 +72,7 @@ Unless required by applicable law or agreed to in writing, software distributed
 
 [3]: <https://cql.hl7.org/tests.html>
 [4]: <https://alexanderkiel.gitbook.io/blaze/deployment>
-[5]: <https://github.com/samply/blaze/releases/tag/v0.17.5>
+[5]: <https://github.com/samply/blaze/releases/tag/v0.17.6>
 [6]: <https://www.yourkit.com/java/profiler/>
 [7]: <https://www.yourkit.com/.net/profiler/>
 [8]: <https://www.yourkit.com/youmonitor/>

diff --git a/docs/deployment/docker-deployment.md b/docs/deployment/docker-deployment.md
@@ -27,7 +27,7 @@ Blaze should log something like this:
 2021-06-27T11:02:37.834Z ee086ef908c1 main INFO [blaze.core:64] - JVM version: 16.0.2
 2021-06-27T11:02:37.834Z ee086ef908c1 main INFO [blaze.core:65] - Maximum available memory: 1738 MiB
 2021-06-27T11:02:37.835Z ee086ef908c1 main INFO [blaze.core:66] - Number of available processors: 8
-2021-06-27T11:02:37.836Z ee086ef908c1 main INFO [blaze.core:67] - Successfully started Blaze version 0.17.5 in 8.2 seconds
+2021-06-27T11:02:37.836Z ee086ef908c1 main INFO [blaze.core:67] - Successfully started Blaze version 0.17.6 in 8.2 seconds
 ```
 
 In order to test connectivity, query the health endpoint:
@@ -47,7 +47,7 @@ that should return:
 ```json
 {
   "name": "Blaze",
-  "version": "0.17.5"
+  "version": "0.17.6"
 }
 ```
 

diff --git a/docs/deployment/manual-deployment.md b/docs/deployment/manual-deployment.md
@@ -2,12 +2,12 @@
 
 The installation works under Windows, Linux and macOS. The only dependency is an installed OpenJDK 11. Blaze is tested with [AdoptOpenJDK][1].
 
-Blaze runs on the JVM and comes as single JAR file. Download the most recent version [here](https://github.com/samply/blaze/releases/tag/v0.17.5). Look for `blaze-0.17.5-standalone.jar`.
+Blaze runs on the JVM and comes as single JAR file. Download the most recent version [here](https://github.com/samply/blaze/releases/tag/v0.17.6). Look for `blaze-0.17.6-standalone.jar`.
 
 After the download, you can start blaze with the following command (Linux, macOS):
 
 ```sh
-java -jar blaze-0.17.5-standalone.jar -m blaze.core
+java -jar blaze-0.17.6-standalone.jar -m blaze.core
 ```
 
 Blaze will run with an in-memory, volatile database for testing and demo purposes.
@@ -17,14 +17,14 @@ Blaze can be run with durable storage by setting the environment variables `STOR
 Under Linux/macOS:
 
 ```sh
-STORAGE=standalone java -jar blaze-0.17.5-standalone.jar -m blaze.core
+STORAGE=standalone java -jar blaze-0.17.6-standalone.jar -m blaze.core
 ```
 
 Under Windows, you need to set the Environment variables in the PowerShell before starting Blaze:
 
 ```powershell
 $Env:STORAGE="standalone"
-java -jar blaze-0.17.5-standalone.jar -m blaze.core
+java -jar blaze-0.17.6-standalone.jar -m blaze.core
 ```
 
 This will create three directories called `index`, `transaction` and `resource` inside the current working directory, one for each database part used.
@@ -42,7 +42,7 @@ The output should look like this:
 2021-06-27T11:02:37.834Z ee086ef908c1 main INFO [blaze.core:64] - JVM version: 16.0.2
 2021-06-27T11:02:37.834Z ee086ef908c1 main INFO [blaze.core:65] - Maximum available memory: 1738 MiB
 2021-06-27T11:02:37.835Z ee086ef908c1 main INFO [blaze.core:66] - Number of available processors: 8
-2021-06-27T11:02:37.836Z ee086ef908c1 main INFO [blaze.core:67] - Successfully started Blaze version 0.17.5 in 8.2 seconds
+2021-06-27T11:02:37.836Z ee086ef908c1 main INFO [blaze.core:67] - Successfully started Blaze version 0.17.6 in 8.2 seconds
 ```
 
 In order to test connectivity, query the health endpoint:
@@ -62,7 +62,7 @@ that should return:
 ```json
 {
   "name": "Blaze",
-  "version": "0.17.5"
+  "version": "0.17.6"
 }
 ```
 

diff --git a/docs/performance/fhir-search.md b/docs/performance/fhir-search.md
@@ -29,9 +29,9 @@ time curl -s "http://localhost:8080/fhir/Observation?code=http://loinc.org|$CODE
 | EPYC 7543P  |      128 |             4 |                1 |        29 M |           28 M | 17861-6 |  171 k |    0.152 |
 | EPYC 7543P  |      128 |             4 |                1 |        29 M |           28 M | 39156-5 |  967 k |    0.804 |
 | EPYC 7543P  |      128 |             4 |                1 |        29 M |           28 M | 29463-7 |  1.3 M |    1.088 |
-| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 17861-6 |  1.7 M |    1.472 |
-| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 39156-5 |  9.7 M |    8.690 |
-| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 29463-7 |   13 M |   11.410 |
+| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 17861-6 |  1.7 M |    1.304 |
+| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 39156-5 |  9.7 M |    7.768 |
+| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 29463-7 |   13 M |    9.954 |
 
 According to the measurements the time needed by Blaze to count resources only depends on the number of hits and equals roughly in **1 second per 1 million hits**.
 
@@ -56,9 +56,9 @@ blazectl download --server http://localhost:8080/fhir Observation -q "code=http:
 | EPYC 7543P  |      128 |             4 |                1 |        29 M |           28 M | 17861-6 |  171 k |    4.178 |
 | EPYC 7543P  |      128 |             4 |                1 |        29 M |           28 M | 39156-5 |  967 k |   24.492 |
 | EPYC 7543P  |      128 |             4 |                1 |        29 M |           28 M | 29463-7 |  1.3 M |   32.126 |
-| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 17861-6 |  1.7 M |   42.364 |
-| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 39156-5 |  9.7 M |  239.338 |
-| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 29463-7 |   13 M |  322.330 |
+| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 17861-6 |  1.7 M |   44.994 |
+| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 39156-5 |  9.7 M |  252.942 |
+| EPYC 7543P  |      128 |            30 |               10 |       292 M |          278 M | 29463-7 |   13 M |  343.950 |
 
 According to the measurements the time needed by Blaze to deliver resources only depends on the number of hits and equals roughly in **30 seconds per 1 million hits**.
 

diff --git a/modules/anomaly/.clj-kondo/config.edn b/modules/anomaly/.clj-kondo/config.edn
@@ -13,6 +13,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/anomaly/deps.edn b/modules/anomaly/deps.edn
@@ -23,6 +23,6 @@
   :coverage
   {:extra-deps
    {cloverage/cloverage
-    {:mvn/version "1.2.3"}}
+    {:mvn/version "1.2.4"}}
 
    :main-opts ["-m" "cloverage.coverage" "--codecov" "-p" "src" "-s" "test"]}}}
diff --git a/modules/async/.clj-kondo/config.edn b/modules/async/.clj-kondo/config.edn
@@ -12,6 +12,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/async/deps.edn b/modules/async/deps.edn
@@ -26,6 +26,6 @@
   :coverage
   {:extra-deps
    {cloverage/cloverage
-    {:mvn/version "1.2.3"}}
+    {:mvn/version "1.2.4"}}
 
    :main-opts ["-m" "cloverage.coverage" "--codecov" "-p" "src" "-s" "test"]}}}
diff --git a/modules/async/test/blaze/async/comp_test.clj b/modules/async/test/blaze/async/comp_test.clj
@@ -12,6 +12,7 @@
     [java.util.concurrent TimeUnit]))
 
 
+(set! *warn-on-reflection* true)
 (st/instrument)
 
 

diff --git a/modules/async/test/blaze/async/flow_test.clj b/modules/async/test/blaze/async/flow_test.clj
@@ -8,6 +8,7 @@
     [java.util.concurrent SubmissionPublisher]))
 
 
+(set! *warn-on-reflection* true)
 (st/instrument)
 
 

diff --git a/modules/byte-buffer/.clj-kondo/config.edn b/modules/byte-buffer/.clj-kondo/config.edn
@@ -9,6 +9,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/byte-buffer/deps.edn b/modules/byte-buffer/deps.edn
@@ -1,6 +1,6 @@
 {:deps
  {com.google.protobuf/protobuf-java
-  {:mvn/version "3.20.1"}}
+  {:mvn/version "3.21.1"}}
 
  :aliases
  {:test

diff --git a/modules/byte-string/.clj-kondo/config.edn b/modules/byte-string/.clj-kondo/config.edn
@@ -9,6 +9,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/byte-string/deps.edn b/modules/byte-string/deps.edn
@@ -5,7 +5,7 @@
   {:mvn/version "31.1-jre"}
 
   com.google.protobuf/protobuf-java
-  {:mvn/version "3.20.1"}
+  {:mvn/version "3.21.1"}
 
   com.fasterxml.jackson.core/jackson-databind
   {:mvn/version "2.13.3"}}}
diff --git a/modules/cassandra/.clj-kondo/config.edn b/modules/cassandra/.clj-kondo/config.edn
@@ -9,6 +9,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/cassandra/deps.edn b/modules/cassandra/deps.edn
@@ -34,7 +34,7 @@
   :coverage
   {:extra-deps
    {cloverage/cloverage
-    {:mvn/version "1.2.3"}}
+    {:mvn/version "1.2.4"}}
 
    :main-opts ["-m" "cloverage.coverage" "--codecov" "-p" "src" "-s" "test"
                "-e" ".+spec"]}}}
diff --git a/modules/cassandra/src/blaze/cassandra/spec.clj b/modules/cassandra/src/blaze/cassandra/spec.clj
@@ -6,6 +6,9 @@
     [java.util EnumSet]))
 
 
+(set! *warn-on-reflection* true)
+
+
 (s/def :blaze.cassandra/contact-points
   (s/and string? #(re-matches #"[^:]+:\d+(,[^:]+:\d+)*" %)))
 
@@ -23,7 +26,7 @@
 
 
 (s/def :blaze.cassandra/put-consistency-level
-  (into #{} (map #(.name %)) (EnumSet/allOf DefaultConsistencyLevel)))
+  (into #{} (map #(.name ^Enum %)) (EnumSet/allOf DefaultConsistencyLevel)))
 
 
 (s/def :blaze.cassandra/max-concurrent-read-requests

diff --git a/modules/cassandra/test/blaze/cassandra/config_test.clj b/modules/cassandra/test/blaze/cassandra/config_test.clj
@@ -9,6 +9,7 @@
     [java.net InetSocketAddress]))
 
 
+(set! *warn-on-reflection* true)
 (st/instrument)
 
 

diff --git a/modules/cassandra/test/blaze/cassandra_test.clj b/modules/cassandra/test/blaze/cassandra_test.clj
@@ -22,10 +22,10 @@
     [com.datastax.oss.driver.api.core.servererrors
      WriteTimeoutException WriteType]
     [java.nio ByteBuffer]
-    #_{:clj-kondo/ignore [:unused-import]}
     [java.util.concurrent CompletionStage]))
 
 
+(set! *warn-on-reflection* true)
 (st/instrument)
 
 

diff --git a/modules/coll/.clj-kondo/config.edn b/modules/coll/.clj-kondo/config.edn
@@ -9,6 +9,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/coll/deps.edn b/modules/coll/deps.edn
@@ -15,7 +15,7 @@
   :coverage
   {:extra-deps
    {cloverage/cloverage
-    {:mvn/version "1.2.3"}}
+    {:mvn/version "1.2.4"}}
 
    :main-opts ["-m" "cloverage.coverage" "--codecov" "-p" "src" "-s" "test"
                "-e" ".+spec"]}}}
diff --git a/modules/cql/.clj-kondo/config.edn b/modules/cql/.clj-kondo/config.edn
@@ -33,7 +33,10 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :output
  {:exclude-files ["^test/data_readers.clj"]}

diff --git a/modules/cql/deps.edn b/modules/cql/deps.edn
@@ -49,7 +49,7 @@
   :coverage
   {:extra-deps
    {cloverage/cloverage
-    {:mvn/version "1.2.3"}}
+    {:mvn/version "1.2.4"}}
 
    :main-opts ["-m" "cloverage.coverage" "--codecov" "-p" "src" "-s" "test"
                "-e" ".*spec$"]}}}
diff --git a/modules/cql/src/blaze/elm/compiler/simple_values.clj b/modules/cql/src/blaze/elm/compiler/simple_values.clj
@@ -11,6 +11,9 @@
     [blaze.elm.util :as elm-util]))
 
 
+(set! *warn-on-reflection* true)
+
+
 ;; 1.1 Literal
 ;;
 ;; The Literal type defines a single scalar value. For example, the literal 5,
@@ -21,7 +24,7 @@
 
 (defn- parse-int [s]
   (try
-    (.longValue (Integer/parseInt s))
+    (.longValue (Integer/valueOf ^String s))
     (catch NumberFormatException _
       (throw-anom (ba/incorrect (format "Incorrect integer literal `%s`." s))))))
 

diff --git a/modules/cql/test/blaze/elm/compiler/test_util.clj b/modules/cql/test/blaze/elm/compiler/test_util.clj
@@ -12,6 +12,9 @@
     [java.time OffsetDateTime ZoneOffset]))
 
 
+(set! *warn-on-reflection* true)
+
+
 (defn instrument-compile []
   (st/instrument
     `c/compile

diff --git a/modules/db-protocols/.clj-kondo/config.edn b/modules/db-protocols/.clj-kondo/config.edn
@@ -9,6 +9,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/db-resource-store-cassandra/.clj-kondo/config.edn b/modules/db-resource-store-cassandra/.clj-kondo/config.edn
@@ -14,6 +14,9 @@
   {:level :error}
 
   :reduce-without-init
-  {:level :warning}}
+  {:level :warning}
+
+  :warn-on-reflection
+  {:level :warning :warn-only-on-interop true}}
 
  :skip-comments true}
diff --git a/modules/db-resource-store-cassandra/deps.edn b/modules/db-resource-store-cassandra/deps.edn
@@ -32,6 +32,6 @@
   :coverage
   {:extra-deps
    {cloverage/cloverage
-    {:mvn/version "1.2.3"}}
+    {:mvn/version "1.2.4"}}
 
    :main-opts ["-m" "cloverage.coverage" "--codecov" "-p" "src" "-s" "test"]}}}
diff --git a/modules/db-resource-store-cassandra/src/blaze/db/resource_store/cassandra/statement.clj b/modules/db-resource-store-cassandra/src/blaze/db/resource_store/cassandra/statement.clj
@@ -4,6 +4,9 @@
     [com.datastax.oss.driver.api.core.cql SimpleStatement]))
 
 
+(set! *warn-on-reflection* true)
+
+
 (def get-statement
   "The get statement retrieves the content according to the `hash`.