Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update test_gsMetZobe1.yaml #50

Merged
merged 3 commits into from
Aug 15, 2024
Merged

Update test_gsMetZobe1.yaml #50

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
9a2ff7e
Update test_gsMetZobe1.yaml
ksenia-krasheninnikova Aug 14, 2024
f404581
Update test_full.config
ksenia-krasheninnikova Aug 14, 2024
4b9abd5
Prettier fix
Aug 14, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 4 additions & 1 deletion assets/test_gsMetZobe1.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,10 @@
dataset:
id: gsMetZobe1
illumina_10X:
reads: /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/
reads:
- /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/gsMetZobe1_S6_L008_R1_001.fastq.gz
- /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/gsMetZobe1_S6_L008_R2_001.fastq.gz
- /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/gsMetZobe1_S6_L008_I1_001.fastq.gz
pacbio:
reads:
- reads: /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/pacbio/m64125_200823_145825.ccs.bc1019_BAK8B_OA--bc1019_BAK8B_OA.filtered.fasta.gz
Expand Down
1 change: 0 additions & 1 deletion conf/test_full.config
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,6 +22,5 @@ params {

// Input data for full size test
input = "${projectDir}/assets/test_gsMetZobe1.yaml"
polishing_on = true
hifiasm_hic_on = true
}
Loading