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20 Open 19 Closed
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Issues list

python2 run_sate.py error
#40 opened Feb 7, 2021 by 1457634627
1
Error from the begining with read()
#39 opened Aug 19, 2020 by lalalagartija
Zombie processes on some files (not sure of cause)
#36 opened May 22, 2015 by brantfaircloth
3
Protein and DNA settings do not get updated in GUI
#35 opened Jan 30, 2014 by smirarab
should check for taxa with non-overlapping gene content.
#31 opened May 22, 2012 by mtholder
zombie processes when GUI is stopped Urgent
#29 opened May 22, 2012 by mtholder
bootstrapping on final RAxML tree future improvement (not urgent)
#28 opened May 22, 2012 by mtholder
export RAxML partitions file to the output dir feature request
#27 opened May 22, 2012 by mtholder
1
Preserving the order of sequences feature request
#26 opened May 22, 2012 by smirarab
Prank is not given a guide tree inside sate future improvement (not urgent)
#25 opened May 22, 2012 by smirarab
scrollable GUI feature request GUI
#22 opened May 21, 2012 by mtholder
feature request: tab cycling through gui elements feature request GUI
#21 opened May 21, 2012 by mtholder
virus protection software may require users to allow each bundled tool GUI Urgent
#20 opened May 21, 2012 by mtholder
unicode support for input filepaths GUI need to verify issue Urgent
#18 opened May 21, 2012 by mtholder
2
decomposition problem on unresolved edges
#13 opened Apr 16, 2012 by smirarab
5
Defaults are not set properly when run from command-line
#12 opened Apr 10, 2012 by smirarab
postprocessing tree search fixed needs tests
#11 opened Mar 2, 2012 by mtholder
1
Interplay of max_subproblem_frac and max_subproblem_size
#8 opened Dec 14, 2011 by smirarab
Assuming "mafft" is a python script future improvement (not urgent)
#4 opened Oct 22, 2011 by smirarab
2
Multiple threads and initial alignment fixed needs tests
#3 opened Oct 20, 2011 by smirarab
1
ProTip! Exclude everything labeled bug with -label:bug.