The Stochastic CLS machine
The Stochastic CLS machine (SCLSm) is a simulator of biological systems based on the Stochastic Calculus of Looping Sequences (Stochastic CLS). The Stochastic CLS is a formalism based on term rewriting that has been developed to describe biomolecular systems in cells. SCLSm is a simulator having Stochastic CLS as its input language and that has been implemented with scalability in mind.
For more information, have a look at http://www.di.unipi.it/msvbio/
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