Skip to content

Issues: schneebergerlab/syri

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

21 Open 248 Closed
21 Open 248 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Error: the following files are required: --genomes
#281 opened Jan 16, 2025 by GurjotSinghSidhu
Can Syri analyze alignment results between a diploid and a hexaploid?
#280 opened Jan 16, 2025 by majssssa
*.qry.fasta
#278 opened Jan 14, 2025 by xubiy
KeyError: 'chr18'
#276 opened Jan 11, 2025 by Czennie1
2
Warning message: No primary alignment found for reference sequence Chr9. This could mean that the entire chromosome Chr9 is reapeated.
#275 opened Jan 8, 2025 by Sabrili
2
The number of translocations in the summary file is different from that in the output file
#274 opened Dec 26, 2024 by Clark1016
1
VCFfomat
#273 opened Dec 21, 2024 by luozzz-00
1
Error in output files
#269 opened Nov 23, 2024 by SaharSalimi
2
syri is not detecting huge indels
#266 opened Oct 7, 2024 by ivaneskos
1
The difference between PAV and INS and DEL
#265 opened Sep 24, 2024 by shiyi-pan
1
syri stopped running for unknown reasons
#264 opened Aug 23, 2024 by gaochenx
2
Support for promer
#259 opened Jul 3, 2024 by bricoletc
3
ERROR syri:201 - Length of query sequence of Chr1 is less than the maximum coordinate of its aligned regions
#251 opened May 13, 2024 by Sabrili
7
Consult DUP/INVDP for details
#248 opened Apr 27, 2024 by Gene2love
2
Request for Guidance on Converting NOTALs to Presence in Syri Outputs
#246 opened Apr 23, 2024 by Lancer-sudo-png
3
empty output of chroder
#182 opened Mar 1, 2023 by kendaida
6
Support of wfmash PAF as input
#144 opened May 11, 2022 by baozg
18
GT field
#129 opened Mar 28, 2022 by kdelmore
3
SyRI identifying wrong chromosomes to reverse complement
#111 opened Dec 1, 2021 by kaede0e
11
inversion detect problem
#100 opened Oct 1, 2021 by shiyi-pan
18
minimap2-2.20: inversions disappear!
#91 opened Jun 30, 2021 by ricardo-aaron
7
ProTip! no:milestone will show everything without a milestone.