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fix license input
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anroy1 committed Oct 30, 2024
1 parent 425ca6f commit d2c9da3
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Showing 2 changed files with 1 addition and 1 deletion.
1 change: 1 addition & 0 deletions subworkflows/nf-neuro/anatomical_segmentation/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,7 @@ workflow ANATOMICAL_SEGMENTATION {
ch_versions = Channel.empty()

if ( params.run_synthseg ) {
ch_fs_license.view()
// ** Freesurfer synthseg segmentation ** //
SEGMENTATION_SYNTHSEG (
ch_image
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Original file line number Diff line number Diff line change
Expand Up @@ -151,7 +151,6 @@ nextflow_workflow {
input[2] = Channel.empty()
input[3] = ch_split_test_data.freesurfer.map{
test_data_directory -> [
[ id:'test' ],
file("\${test_data_directory}/license.txt", checkIfExists: true)
]
}
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