Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Serial em #31

Open
wants to merge 24 commits into
base: devel
Choose a base branch
from
Open

Serial em #31

wants to merge 24 commits into from

Conversation

miguelhroca
Copy link
Collaborator

functionality of serialEM that creates a file with the required parameters to be able to change values inside SerialEM reading from the created file by scipion (the calculation of the values are inside another box from scipion to prevent bugs in another functionalities thus isolating it)

@danielmarchan3
Copy link
Contributor

Quality Gate Passed Quality Gate passed

Issues 7 New issues 0 Accepted issues

Measures 0 Security Hotspots No data about Coverage 0.0% Duplication on New Code

See analysis details on SonarCloud

Please check the 7 issues marked by Sonar Cloud.

@danielmarchan3
Copy link
Contributor

Also, please complete the help in the protocol form for the parameters (i.e. maxFrameShift, maxDefocusU, ...) with units and explanations.

emfacilities/protocols/protocol_monitor_serialem.py Outdated Show resolved Hide resolved
emfacilities/protocols/protocol_monitor_serialem.py Outdated Show resolved Hide resolved
emfacilities/protocols/protocol_monitor_serialem.py Outdated Show resolved Hide resolved
emfacilities/protocols/protocol_monitor_serialem.py Outdated Show resolved Hide resolved
Copy link

Quality Gate Passed Quality Gate passed

Issues
1 New issue
0 Accepted issues

Measures
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud

@albertmena albertmena requested a review from danielmarchan3 May 21, 2024 10:21
STATUS_STOP = [STATUS_FINISHED, STATUS_FAILED, STATUS_ABORTED]

class ProtMonitorSerialEm(ProtMonitor):
""" Stores values for SerialEM to read ,
Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Be more verbose to explain what this protocol does

@albertmena
Copy link
Collaborator

@danielmarchan3 How is this PR? need a second review? works?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants