Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

reading directly from S3 #1323

Closed
djarecka opened this issue Jan 22, 2024 · 1 comment
Closed

reading directly from S3 #1323

djarecka opened this issue Jan 22, 2024 · 1 comment

Comments

@djarecka
Copy link

Please describe your wishes and possible alternatives to achieve the desired result.

I would like to read anndata files directly from S3 without need to download them. Some existing anndata file are pretty big, and we can't ask everyone to download the content first.

This is related to the discussion in #634

Possible solution:
Using remfile library that provides a file-like object for reading a remote file over HTTP, optimized for use with h5py. See a draft PR #1322

@flying-sheep
Copy link
Member

OK so #634 is an existing issue for this. Sorry for the confusion.

I’m going to close this issue, we’ll figure out the best path in #634 and go from there!

@flying-sheep flying-sheep closed this as not planned Won't fix, can't repro, duplicate, stale Jan 23, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants