Note

The functionality developed in this repo has now been integrated into pertpy.

This repo holds prototypes for a differential expression interface for scverse that has been developed at the scverse hackathon in Cambridge, UK in November 2023. It has now been archived as read-only.

multi-condition-comparisions

Functions for analyzing and visualizing multi-condition single-cell data (prototypes created at Cambridge hackathon)

Getting started

Please refer to the documentation. In particular, the

• API documentation.

Installation

You need to have Python 3.9 or newer installed on your system. If you don't have Python installed, we recommend installing Mambaforge.

There are several alternative options to install multi-condition-comparisions:

1. Install the latest development version:

pip install git+https://github.com/scverse/multi-condition-comparisions.git@main

Release notes

See the changelog.

Contact

For questions and help requests, you can reach out in the scverse discourse. If you found a bug, please use the issue tracker.

Citation

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