pertpy-tutorials

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This repository hosts all tutorials for pertpy. They are automatically run on pull requests against pertpy.

Please refer to the pertpy documentation for rendered versions.

Name		Name	Last commit message	Last commit date
Latest commit History 213 Commits
.gitignore		.gitignore
.pre-commit-config.yaml		.pre-commit-config.yaml
LICENSE		LICENSE
README.md		README.md
augur.ipynb		augur.ipynb
cinemaot.ipynb		cinemaot.ipynb
dialogue.ipynb		dialogue.ipynb
differential_gene_expression.ipynb		differential_gene_expression.ipynb
distance_tests.ipynb		distance_tests.ipynb
distances.ipynb		distances.ipynb
enrichment.ipynb		enrichment.ipynb
expression_prediction_evaluation.ipynb		expression_prediction_evaluation.ipynb
guide_rna_assignment.ipynb		guide_rna_assignment.ipynb
mcfarland_use_case.ipynb		mcfarland_use_case.ipynb
metadata_annotation.ipynb		metadata_annotation.ipynb
milo.ipynb		milo.ipynb
mixscape.ipynb		mixscape.ipynb
norman_use_case.ipynb		norman_use_case.ipynb
ontology_mapping.ipynb		ontology_mapping.ipynb
perturbation_space.ipynb		perturbation_space.ipynb
pyproject.toml		pyproject.toml
sccoda.ipynb		sccoda.ipynb
sccoda_extended.ipynb		sccoda_extended.ipynb
sccoda_tasccoda_case_study.ipynb		sccoda_tasccoda_case_study.ipynb
scgen_perturbation_prediction.ipynb		scgen_perturbation_prediction.ipynb
tasccoda.ipynb		tasccoda.ipynb
zhang_use_case.ipynb		zhang_use_case.ipynb

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