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antigen specificity prediction #371

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grst opened this issue Oct 18, 2022 · 1 comment
Open

antigen specificity prediction #371

grst opened this issue Oct 18, 2022 · 1 comment

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@grst
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grst commented Oct 18, 2022

Description of feature

The first reasonable methods to predict antigen specificity emerge, e.g.

These are conceptually different from querying databases through sequence distance metrics or autoencoders, as they do not simply model the sequence similarity, but explicitly model the specificity.

Would be nice to call them directly from scirpy.

@FFinotello, potentially another good student task.
@grst grst added this to scirpy-dev May 28, 2024
@grst grst moved this to prio2 in scirpy-dev May 28, 2024
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grst commented Jul 25, 2024

A new, interesting method: https://www.nature.com/articles/s43588-024-00653-0

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