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I've recently started using scirpy for TCR analyses. For the repertoire overlap, the scipy distances are the only available scores it seems (with Jaccard being the default one).
Do you think it would be possible to also integrate the Morisita-Horn similarity index, as it seems to be the standard measure used in most publications?
Best,
Nicolas
The text was updated successfully, but these errors were encountered:
NicolasSompairac
changed the title
Add the Morisita index for repertoire overlap similarity scores
Add the Morisita-Horn index for repertoire overlap similarity scores
Jan 29, 2024
Hi there,
I've recently started using scirpy for TCR analyses. For the repertoire overlap, the scipy distances are the only available scores it seems (with Jaccard being the default one).
Do you think it would be possible to also integrate the Morisita-Horn similarity index, as it seems to be the standard measure used in most publications?
Best,
Nicolas
The text was updated successfully, but these errors were encountered: