fix Dockerfile #5
Workflow file for this run
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| name: Build Docker image | |
| on: | |
| workflow_run: | |
| workflows: ["Release"] | |
| types: | |
| - completed | |
| workflow_dispatch: | |
| push: | |
| env: | |
| REGISTRY: ghcr.io | |
| IMAGE_NAME: ${{ github.repository }} | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| if: ${{ github.event_name == 'workflow_run' && github.event.workflow_run.conclusion == 'success' && startsWith(github.ref, 'refs/tags/v') || github.event_name == 'workflow_dispatch' || github.event_name == 'push' }} | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -e {0} # -e to fail on error | |
| permissions: | |
| contents: read | |
| packages: write | |
| attestations: write | |
| id-token: write | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.x" | |
| - name: Install pip-tools | |
| run: pip install pip | |
| - name: Get latest versions | |
| id: get_versions | |
| run: | | |
| SPATIALDATA_VERSION=$(pip index versions spatialdata | grep "Available versions" | sed 's/Available versions: //' | awk -F', ' '{print $1}') | |
| SPATIALDATA_IO_VERSION=$(pip index versions spatialdata-io | grep "Available versions" | sed 's/Available versions: //' | awk -F', ' '{print $1}') | |
| SPATIALDATA_PLOT_VERSION=$(pip index versions spatialdata-plot | grep "Available versions" | sed 's/Available versions: //' | awk -F', ' '{print $1}') | |
| echo "SPATIALDATA_VERSION=${SPATIALDATA_VERSION}" >> $GITHUB_ENV | |
| echo "SPATIALDATA_IO_VERSION=${SPATIALDATA_IO_VERSION}" >> $GITHUB_ENV | |
| echo "SPATIALDATA_PLOT_VERSION=${SPATIALDATA_PLOT_VERSION}" >> $GITHUB_ENV | |
| - name: Login to GitHub Container Registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ${{ env.REGISTRY }} | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| push: true | |
| cache-from: type=registry,ref=${{ env.REGISTRY }}/scverse/spatialdata:buildcache | |
| cache-to: type=inline,ref=${{ env.REGISTRY }}/scverse/spatialdata:buildcache | |
| build-args: | | |
| SPATIALDATA_VERSION=${{ env.SPATIALDATA_VERSION }} | |
| SPATIALDATA_IO_VERSION=${{ env.SPATIALDATA_IO_VERSION }} | |
| SPATIALDATA_PLOT_VERSION=${{ env.SPATIALDATA_PLOT_VERSION }} | |
| tags: ${{ env.REGISTRY }}/scverse/spatialdata:spatialdata${{ env.SPATIALDATA_VERSION }}_spatialdata-io${{ env.SPATIALDATA_IO_VERSION }}_spatialdata-plot${{ env.SPATIALDATA_PLOT_VERSION }} |