[DOC] Use doxygen-awesome

seqan · Sep 7, 2023 · 4d532d5 · 4d532d5
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diff --git a/test/documentation/doxygen-awesome/doxygen-awesome-darkmode-toggle.js b/test/documentation/doxygen-awesome/doxygen-awesome-darkmode-toggle.js
@@ -0,0 +1,157 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2021 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeDarkModeToggle extends HTMLElement {
+    // SVG icons from https://fonts.google.com/icons
+    // Licensed under the Apache 2.0 license:
+    // https://www.apache.org/licenses/LICENSE-2.0.html
+    static lightModeIcon = `<svg xmlns="http://www.w3.org/2000/svg" enable-background="new 0 0 24 24" height="24px" viewBox="0 0 24 24" width="24px" fill="#FCBF00"><rect fill="none" height="24" width="24"/><circle cx="12" cy="12" opacity=".3" r="3"/><path d="M12,9c1.65,0,3,1.35,3,3s-1.35,3-3,3s-3-1.35-3-3S10.35,9,12,9 M12,7c-2.76,0-5,2.24-5,5s2.24,5,5,5s5-2.24,5-5 S14.76,7,12,7L12,7z M2,13l2,0c0.55,0,1-0.45,1-1s-0.45-1-1-1l-2,0c-0.55,0-1,0.45-1,1S1.45,13,2,13z M20,13l2,0c0.55,0,1-0.45,1-1 s-0.45-1-1-1l-2,0c-0.55,0-1,0.45-1,1S19.45,13,20,13z M11,2v2c0,0.55,0.45,1,1,1s1-0.45,1-1V2c0-0.55-0.45-1-1-1S11,1.45,11,2z M11,20v2c0,0.55,0.45,1,1,1s1-0.45,1-1v-2c0-0.55-0.45-1-1-1C11.45,19,11,19.45,11,20z M5.99,4.58c-0.39-0.39-1.03-0.39-1.41,0 c-0.39,0.39-0.39,1.03,0,1.41l1.06,1.06c0.39,0.39,1.03,0.39,1.41,0s0.39-1.03,0-1.41L5.99,4.58z M18.36,16.95 c-0.39-0.39-1.03-0.39-1.41,0c-0.39,0.39-0.39,1.03,0,1.41l1.06,1.06c0.39,0.39,1.03,0.39,1.41,0c0.39-0.39,0.39-1.03,0-1.41 L18.36,16.95z M19.42,5.99c0.39-0.39,0.39-1.03,0-1.41c-0.39-0.39-1.03-0.39-1.41,0l-1.06,1.06c-0.39,0.39-0.39,1.03,0,1.41 s1.03,0.39,1.41,0L19.42,5.99z M7.05,18.36c0.39-0.39,0.39-1.03,0-1.41c-0.39-0.39-1.03-0.39-1.41,0l-1.06,1.06 c-0.39,0.39-0.39,1.03,0,1.41s1.03,0.39,1.41,0L7.05,18.36z"/></svg>`
+    static darkModeIcon = `<svg xmlns="http://www.w3.org/2000/svg" enable-background="new 0 0 24 24" height="24px" viewBox="0 0 24 24" width="24px" fill="#FE9700"><rect fill="none" height="24" width="24"/><path d="M9.37,5.51C9.19,6.15,9.1,6.82,9.1,7.5c0,4.08,3.32,7.4,7.4,7.4c0.68,0,1.35-0.09,1.99-0.27 C17.45,17.19,14.93,19,12,19c-3.86,0-7-3.14-7-7C5,9.07,6.81,6.55,9.37,5.51z" opacity=".3"/><path d="M9.37,5.51C9.19,6.15,9.1,6.82,9.1,7.5c0,4.08,3.32,7.4,7.4,7.4c0.68,0,1.35-0.09,1.99-0.27C17.45,17.19,14.93,19,12,19 c-3.86,0-7-3.14-7-7C5,9.07,6.81,6.55,9.37,5.51z M12,3c-4.97,0-9,4.03-9,9s4.03,9,9,9s9-4.03,9-9c0-0.46-0.04-0.92-0.1-1.36 c-0.98,1.37-2.58,2.26-4.4,2.26c-2.98,0-5.4-2.42-5.4-5.4c0-1.81,0.89-3.42,2.26-4.4C12.92,3.04,12.46,3,12,3L12,3z"/></svg>`
+    static title = "Toggle Light/Dark Mode"
+
+    static prefersLightModeInDarkModeKey = "prefers-light-mode-in-dark-mode"
+    static prefersDarkModeInLightModeKey = "prefers-dark-mode-in-light-mode"
+
+    static _staticConstructor = function() {
+        DoxygenAwesomeDarkModeToggle.enableDarkMode(DoxygenAwesomeDarkModeToggle.userPreference)
+        // Update the color scheme when the browsers preference changes
+        // without user interaction on the website.
+        window.matchMedia('(prefers-color-scheme: dark)').addEventListener('change', event => {
+            DoxygenAwesomeDarkModeToggle.onSystemPreferenceChanged()
+        })
+        // Update the color scheme when the tab is made visible again.
+        // It is possible that the appearance was changed in another tab 
+        // while this tab was in the background.
+        document.addEventListener("visibilitychange", visibilityState => {
+            if (document.visibilityState === 'visible') {
+                DoxygenAwesomeDarkModeToggle.onSystemPreferenceChanged()
+            }
+        });
+    }()
+
+    static init() {
+        $(function() {
+            $(document).ready(function() {
+                const toggleButton = document.createElement('doxygen-awesome-dark-mode-toggle')
+                toggleButton.title = DoxygenAwesomeDarkModeToggle.title
+                toggleButton.updateIcon()
+
+                window.matchMedia('(prefers-color-scheme: dark)').addEventListener('change', event => {
+                    toggleButton.updateIcon()
+                })
+                document.addEventListener("visibilitychange", visibilityState => {
+                    if (document.visibilityState === 'visible') {
+                        toggleButton.updateIcon()
+                    }
+                });
+
+                $(document).ready(function(){
+                    document.getElementById("MSearchBox").parentNode.appendChild(toggleButton)
+                })
+                $(window).resize(function(){
+                    document.getElementById("MSearchBox").parentNode.appendChild(toggleButton)
+                })
+            })
+        })
+    }
+
+    constructor() {
+        super();
+        this.onclick=this.toggleDarkMode
+    }
+
+    /**
+     * @returns `true` for dark-mode, `false` for light-mode system preference
+     */
+    static get systemPreference() {
+        return window.matchMedia('(prefers-color-scheme: dark)').matches
+    }
+
+    /**
+     * @returns `true` for dark-mode, `false` for light-mode user preference
+     */
+    static get userPreference() {
+        return (!DoxygenAwesomeDarkModeToggle.systemPreference && localStorage.getItem(DoxygenAwesomeDarkModeToggle.prefersDarkModeInLightModeKey)) || 
+        (DoxygenAwesomeDarkModeToggle.systemPreference && !localStorage.getItem(DoxygenAwesomeDarkModeToggle.prefersLightModeInDarkModeKey))
+    }
+
+    static set userPreference(userPreference) {
+        DoxygenAwesomeDarkModeToggle.darkModeEnabled = userPreference
+        if(!userPreference) {
+            if(DoxygenAwesomeDarkModeToggle.systemPreference) {
+                localStorage.setItem(DoxygenAwesomeDarkModeToggle.prefersLightModeInDarkModeKey, true)
+            } else {
+                localStorage.removeItem(DoxygenAwesomeDarkModeToggle.prefersDarkModeInLightModeKey)
+            }
+        } else {
+            if(!DoxygenAwesomeDarkModeToggle.systemPreference) {
+                localStorage.setItem(DoxygenAwesomeDarkModeToggle.prefersDarkModeInLightModeKey, true)
+            } else {
+                localStorage.removeItem(DoxygenAwesomeDarkModeToggle.prefersLightModeInDarkModeKey)
+            }
+        }
+        DoxygenAwesomeDarkModeToggle.onUserPreferenceChanged()
+    }
+
+    static enableDarkMode(enable) {
+        if(enable) {
+            DoxygenAwesomeDarkModeToggle.darkModeEnabled = true
+            document.documentElement.classList.add("dark-mode")
+            document.documentElement.classList.remove("light-mode")
+        } else {
+            DoxygenAwesomeDarkModeToggle.darkModeEnabled = false
+            document.documentElement.classList.remove("dark-mode")
+            document.documentElement.classList.add("light-mode")
+        }
+    }
+
+    static onSystemPreferenceChanged() {
+        DoxygenAwesomeDarkModeToggle.darkModeEnabled = DoxygenAwesomeDarkModeToggle.userPreference
+        DoxygenAwesomeDarkModeToggle.enableDarkMode(DoxygenAwesomeDarkModeToggle.darkModeEnabled)
+    }
+
+    static onUserPreferenceChanged() {
+        DoxygenAwesomeDarkModeToggle.enableDarkMode(DoxygenAwesomeDarkModeToggle.darkModeEnabled)
+    }
+
+    toggleDarkMode() {
+        DoxygenAwesomeDarkModeToggle.userPreference = !DoxygenAwesomeDarkModeToggle.userPreference
+        this.updateIcon()
+    }
+
+    updateIcon() {
+        if(DoxygenAwesomeDarkModeToggle.darkModeEnabled) {
+            this.innerHTML = DoxygenAwesomeDarkModeToggle.darkModeIcon
+        } else {
+            this.innerHTML = DoxygenAwesomeDarkModeToggle.lightModeIcon
+        }
+    }
+}
+
+customElements.define("doxygen-awesome-dark-mode-toggle", DoxygenAwesomeDarkModeToggle);
diff --git a/test/documentation/doxygen-awesome/doxygen-awesome-fragment-copy-button.js b/test/documentation/doxygen-awesome/doxygen-awesome-fragment-copy-button.js
@@ -0,0 +1,85 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2022 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeFragmentCopyButton extends HTMLElement {
+    constructor() {
+        super();
+        this.onclick=this.copyContent
+    }
+    static title = "Copy to clipboard"
+    static copyIcon = `<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" width="24" height="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M16 1H4c-1.1 0-2 .9-2 2v14h2V3h12V1zm3 4H8c-1.1 0-2 .9-2 2v14c0 1.1.9 2 2 2h11c1.1 0 2-.9 2-2V7c0-1.1-.9-2-2-2zm0 16H8V7h11v14z"/></svg>`
+    static successIcon = `<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" width="24" height="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M9 16.17L4.83 12l-1.42 1.41L9 19 21 7l-1.41-1.41L9 16.17z"/></svg>`
+    static successDuration = 980
+    static init() {
+        $(function() {
+            $(document).ready(function() {
+                if(navigator.clipboard) {
+                    const fragments = document.getElementsByClassName("fragment")
+                    for(const fragment of fragments) {
+                        const fragmentWrapper = document.createElement("div")
+                        fragmentWrapper.className = "doxygen-awesome-fragment-wrapper"
+                        const fragmentCopyButton = document.createElement("doxygen-awesome-fragment-copy-button")
+                        fragmentCopyButton.innerHTML = DoxygenAwesomeFragmentCopyButton.copyIcon
+                        fragmentCopyButton.title = DoxygenAwesomeFragmentCopyButton.title
+
+                        fragment.parentNode.replaceChild(fragmentWrapper, fragment)
+                        fragmentWrapper.appendChild(fragment)
+                        fragmentWrapper.appendChild(fragmentCopyButton)
+
+                    }
+                }
+            })
+        })
+    }
+
+
+    copyContent() {
+        const content = this.previousSibling.cloneNode(true)
+        // filter out line number from file listings
+        content.querySelectorAll(".lineno, .ttc").forEach((node) => {
+            node.remove()
+        })
+        let textContent = content.textContent
+        // remove trailing newlines that appear in file listings
+        let numberOfTrailingNewlines = 0
+        while(textContent.charAt(textContent.length - (numberOfTrailingNewlines + 1)) == '\n') {
+            numberOfTrailingNewlines++;
+        }
+        textContent = textContent.substring(0, textContent.length - numberOfTrailingNewlines)
+        navigator.clipboard.writeText(textContent);
+        this.classList.add("success")
+        this.innerHTML = DoxygenAwesomeFragmentCopyButton.successIcon
+        window.setTimeout(() => {
+            this.classList.remove("success")
+            this.innerHTML = DoxygenAwesomeFragmentCopyButton.copyIcon
+        }, DoxygenAwesomeFragmentCopyButton.successDuration);
+    }
+}
+
+customElements.define("doxygen-awesome-fragment-copy-button", DoxygenAwesomeFragmentCopyButton)
diff --git a/test/documentation/doxygen-awesome/doxygen-awesome-interactive-toc.js b/test/documentation/doxygen-awesome/doxygen-awesome-interactive-toc.js
@@ -0,0 +1,81 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2022 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeInteractiveToc {
+    static topOffset = 38
+    static hideMobileMenu = true
+    static headers = []
+
+    static init() {
+        window.addEventListener("load", () => {
+            let toc = document.querySelector(".contents > .toc")
+            if(toc) {
+                toc.classList.add("interactive")
+                if(!DoxygenAwesomeInteractiveToc.hideMobileMenu) {
+                    toc.classList.add("open")
+                }
+                document.querySelector(".contents > .toc > h3")?.addEventListener("click", () => {
+                    if(toc.classList.contains("open")) {
+                        toc.classList.remove("open")
+                    } else {
+                        toc.classList.add("open")
+                    }
+                })
+
+                document.querySelectorAll(".contents > .toc > ul a").forEach((node) => {
+                    let id = node.getAttribute("href").substring(1)
+                    DoxygenAwesomeInteractiveToc.headers.push({
+                        node: node,
+                        headerNode: document.getElementById(id)
+                    })
+
+                    document.getElementById("doc-content")?.addEventListener("scroll", () => {
+                        DoxygenAwesomeInteractiveToc.update()
+                    })
+                })
+                DoxygenAwesomeInteractiveToc.update()
+            }
+        })
+    }
+
+    static update() {
+        let active = DoxygenAwesomeInteractiveToc.headers[0]?.node
+        DoxygenAwesomeInteractiveToc.headers.forEach((header) => {
+            let position = header.headerNode.getBoundingClientRect().top
+            header.node.classList.remove("active")
+            header.node.classList.remove("aboveActive")
+            if(position < DoxygenAwesomeInteractiveToc.topOffset) {
+                active = header.node
+                active?.classList.add("aboveActive")
+            }
+        })
+        active?.classList.add("active")
+        active?.classList.remove("aboveActive")
+    }
+}
diff --git a/test/documentation/doxygen-awesome/doxygen-awesome-paragraph-link.js b/test/documentation/doxygen-awesome/doxygen-awesome-paragraph-link.js
@@ -0,0 +1,51 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2022 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeParagraphLink {
+    // Icon from https://fonts.google.com/icons
+    // Licensed under the Apache 2.0 license:
+    // https://www.apache.org/licenses/LICENSE-2.0.html
+    static icon = `<svg xmlns="http://www.w3.org/2000/svg" height="20px" viewBox="0 0 24 24" width="20px"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M17 7h-4v2h4c1.65 0 3 1.35 3 3s-1.35 3-3 3h-4v2h4c2.76 0 5-2.24 5-5s-2.24-5-5-5zm-6 8H7c-1.65 0-3-1.35-3-3s1.35-3 3-3h4V7H7c-2.76 0-5 2.24-5 5s2.24 5 5 5h4v-2zm-3-4h8v2H8z"/></svg>`
+    static title = "Permanent Link"
+    static init() {
+        $(function() {
+            $(document).ready(function() {
+                document.querySelectorAll(".contents a.anchor[id], .contents .groupheader > a[id]").forEach((node) => {
+                    let anchorlink = document.createElement("a")
+                    anchorlink.setAttribute("href", `#${node.getAttribute("id")}`)
+                    anchorlink.setAttribute("title", DoxygenAwesomeParagraphLink.title)
+                    anchorlink.classList.add("anchorlink")
+                    node.classList.add("anchor")
+                    anchorlink.innerHTML = DoxygenAwesomeParagraphLink.icon
+                    node.parentElement.appendChild(anchorlink)
+                })
+            })
+        })
+    }
+}