[INFRA] Add linting

.clang-format

@@ -0,0 +1,273 @@
+# SPDX-FileCopyrightText: 2006-2024, Knut Reinert & Freie Universität Berlin
+# SPDX-FileCopyrightText: 2016-2024, Knut Reinert & MPI für molekulare Genetik
+# SPDX-License-Identifier: CC0-1.0
+
+# Format all files in include/test folder, including std module, excluding contrib module
+# find . \( -iname "*.cpp" -or -iname "*.hpp" \) -and -not -path "./lib/*" -and -not -path "./build/*" | xargs clang-format-18 --style=file -i
+# Staged files: git diff --name-only HEAD --diff-filter=ACMRT | grep -E "(\.cpp|\.hpp)$" | xargs clang-format-18 --style=file -i
+---
+Language:        Cpp
+AccessModifierOffset: -4
+AlignAfterOpenBracket: Align
+AlignArrayOfStructures: None
+AlignConsecutiveAssignments:
+  Enabled:         false
+  AcrossEmptyLines: false
+  AcrossComments:  false
+  AlignCompound:   false
+  AlignFunctionPointers: false
+  PadOperators:    true
+AlignConsecutiveBitFields:
+  Enabled:         false
+  AcrossEmptyLines: false
+  AcrossComments:  false
+  AlignCompound:   false
+  AlignFunctionPointers: false
+  PadOperators:    true
+AlignConsecutiveDeclarations:
+  Enabled:         false
+  AcrossEmptyLines: false
+  AcrossComments:  false
+  AlignCompound:   false
+  AlignFunctionPointers: false
+  PadOperators:    true
+AlignConsecutiveMacros:
+  Enabled:         false
+  AcrossEmptyLines: false
+  AcrossComments:  false
+  AlignCompound:   false
+  AlignFunctionPointers: false
+  PadOperators:    true
+AlignConsecutiveShortCaseStatements:
+  Enabled:         false
+  AcrossEmptyLines: false
+  AcrossComments:  false
+  AlignCaseColons: false
+AlignEscapedNewlines: Right
+AlignOperands:   AlignAfterOperator
+AlignTrailingComments:
+  Kind:            Always
+  OverEmptyLines:  0
+AllowAllArgumentsOnNextLine: false
+AllowAllParametersOfDeclarationOnNextLine: false
+AllowBreakBeforeNoexceptSpecifier: Never
+AllowShortBlocksOnASingleLine: Empty
+AllowShortCaseLabelsOnASingleLine: false
+AllowShortCompoundRequirementOnASingleLine: true
+AllowShortEnumsOnASingleLine: false
+AllowShortFunctionsOnASingleLine: None
+AllowShortIfStatementsOnASingleLine: Never
+AllowShortLambdasOnASingleLine: Empty
+AllowShortLoopsOnASingleLine: false
+AlwaysBreakAfterDefinitionReturnType: None
+AlwaysBreakAfterReturnType: None
+AlwaysBreakBeforeMultilineStrings: false
+AlwaysBreakTemplateDeclarations: Yes
+AttributeMacros:
+  - __capability
+BinPackArguments: false
+BinPackParameters: false
+BitFieldColonSpacing: Both
+BraceWrapping:
+  AfterCaseLabel:  true
+  AfterClass:      true
+  AfterControlStatement: Always
+  AfterEnum:       true
+  AfterExternBlock: true
+  AfterFunction:   true
+  AfterNamespace:  true
+  AfterObjCDeclaration: false
+  AfterStruct:     true
+  AfterUnion:      true
+  BeforeCatch:     true
+  BeforeElse:      true
+  BeforeLambdaBody: true
+  BeforeWhile:     true
+  IndentBraces:    false
+  SplitEmptyFunction: false
+  SplitEmptyRecord: false
+  SplitEmptyNamespace: false
+BreakAdjacentStringLiterals: true
+BreakAfterAttributes: Leave
+BreakAfterJavaFieldAnnotations: false
+BreakArrays:     true
+BreakBeforeBinaryOperators: NonAssignment
+BreakBeforeConceptDeclarations: Always
+BreakBeforeBraces: Custom
+BreakBeforeInlineASMColon: OnlyMultiline
+BreakBeforeTernaryOperators: true
+BreakConstructorInitializers: AfterColon
+BreakInheritanceList: AfterColon
+BreakStringLiterals: true
+ColumnLimit:     120
+CommentPragmas:  '^ IWYU pragma:'
+CompactNamespaces: false
+ConstructorInitializerIndentWidth: 4
+ContinuationIndentWidth: 4
+Cpp11BracedListStyle: true
+DerivePointerAlignment: false
+DisableFormat:   false
+EmptyLineAfterAccessModifier: Never
+EmptyLineBeforeAccessModifier: Always
+ExperimentalAutoDetectBinPacking: false
+FixNamespaceComments: true
+ForEachMacros:
+  - foreach
+  - Q_FOREACH
+  - BOOST_FOREACH
+IfMacros:
+  - KJ_IF_MAYBE
+IncludeBlocks:   Regroup
+IncludeCategories:
+  - Regex:           '(<gtest/.*|<benchmark/.*)'
+    Priority:        1
+    SortPriority:    0
+    CaseSensitive:   false
+  - Regex:           '(<[[:alnum:]._]+>)'
+    Priority:        2
+    SortPriority:    0
+    CaseSensitive:   false
+  - Regex:           '<sharg/'
+    Priority:        3
+    SortPriority:    0
+    CaseSensitive:   false
+  - Regex:           '<seqan3/'
+    Priority:        4
+    SortPriority:    0
+    CaseSensitive:   false
+  - Regex:           '<hibf/'
+    Priority:        6
+    SortPriority:    0
+    CaseSensitive:   false
+  - Regex:           '<.*>'
+    Priority:        5
+    SortPriority:    0
+    CaseSensitive:   false
+  - Regex:           '.*'
+    Priority:        7
+    SortPriority:    0
+    CaseSensitive:   false
+IncludeIsMainRegex: '(Test)?$'
+IncludeIsMainSourceRegex: ''
+IndentAccessModifiers: false
+IndentCaseBlocks: false
+IndentCaseLabels: false
+IndentExternBlock: AfterExternBlock
+IndentGotoLabels: true
+IndentPPDirectives: AfterHash
+IndentRequiresClause: true
+IndentWidth:     4
+IndentWrappedFunctionNames: false
+InsertBraces:    false
+InsertNewlineAtEOF: true
+InsertTrailingCommas: None
+IntegerLiteralSeparator:
+  Binary:          4
+  BinaryMinDigits: 0
+  Decimal:         3
+  DecimalMinDigits: 7
+  Hex:             2
+  HexMinDigits:    4
+JavaScriptQuotes: Leave
+JavaScriptWrapImports: true
+KeepEmptyLinesAtTheStartOfBlocks: true
+KeepEmptyLinesAtEOF: false
+LambdaBodyIndentation: Signature
+LineEnding:      DeriveLF
+MacroBlockBegin: ''
+MacroBlockEnd:   ''
+MaxEmptyLinesToKeep: 1
+NamespaceIndentation: None
+ObjCBinPackProtocolList: Never
+ObjCBlockIndentWidth: 2
+ObjCBreakBeforeNestedBlockParam: true
+ObjCSpaceAfterProperty: false
+ObjCSpaceBeforeProtocolList: true
+PackConstructorInitializers: CurrentLine
+PenaltyBreakAssignment: 2
+PenaltyBreakBeforeFirstCallParameter: 19
+PenaltyBreakComment: 300
+PenaltyBreakFirstLessLess: 120
+PenaltyBreakOpenParenthesis: 0
+PenaltyBreakScopeResolution: 500
+PenaltyBreakString: 1000
+PenaltyBreakTemplateDeclaration: 10
+PenaltyExcessCharacter: 1000000
+PenaltyIndentedWhitespace: 0
+PenaltyReturnTypeOnItsOwnLine: 60
+PointerAlignment: Middle
+PPIndentWidth:   -1
+QualifierAlignment: Custom
+QualifierOrder:
+  - static
+  - inline
+  - constexpr
+  - volatile
+  - type
+  - const
+ReferenceAlignment: Pointer
+ReflowComments:  false
+RemoveBracesLLVM: false
+RemoveParentheses: Leave
+RemoveSemicolon: false
+RequiresClausePosition: OwnLine
+RequiresExpressionIndentation: Keyword
+SeparateDefinitionBlocks: Leave
+ShortNamespaceLines: 1
+SkipMacroDefinitionBody: false
+SortIncludes:    CaseInsensitive
+SortJavaStaticImport: Before
+SortUsingDeclarations: LexicographicNumeric
+SpaceAfterCStyleCast: false
+SpaceAfterLogicalNot: false
+SpaceAfterTemplateKeyword: true
+SpaceAroundPointerQualifiers: Default
+SpaceBeforeAssignmentOperators: true
+SpaceBeforeCaseColon: false
+SpaceBeforeCpp11BracedList: false
+SpaceBeforeCtorInitializerColon: true
+SpaceBeforeInheritanceColon: true
+SpaceBeforeJsonColon: false
+SpaceBeforeParens: Custom
+SpaceBeforeParensOptions:
+  AfterControlStatements: true
+  AfterForeachMacros: true
+  AfterFunctionDefinitionName: false
+  AfterFunctionDeclarationName: false
+  AfterIfMacros:   true
+  AfterOverloadedOperator: false
+  AfterPlacementOperator: true
+  AfterRequiresInClause: true
+  AfterRequiresInExpression: true
+  BeforeNonEmptyParentheses: false
+SpaceBeforeRangeBasedForLoopColon: true
+SpaceBeforeSquareBrackets: false
+SpaceInEmptyBlock: false
+SpacesBeforeTrailingComments: 1
+SpacesInAngles:  Never
+SpacesInContainerLiterals: false
+SpacesInLineCommentPrefix:
+  Minimum:         1
+  Maximum:         -1
+SpacesInParens:  Never
+SpacesInParensOptions:
+  InCStyleCasts:   false
+  InConditionalStatements: false
+  InEmptyParentheses: false
+  Other:           false
+SpacesInSquareBrackets: false
+Standard:        c++20
+StatementAttributeLikeMacros:
+  - Q_EMIT
+StatementMacros:
+  - Q_UNUSED
+  - QT_REQUIRE_VERSION
+TabWidth:        4
+UseTab:          Never
+VerilogBreakBetweenInstancePorts: true
+WhitespaceSensitiveMacros:
+  - CF_SWIFT_NAME
+  - NS_SWIFT_NAME
+  - PP_STRINGIZE
+  - STRINGIZE
+...