Update test data

seqan · Jul 11, 2023 · 08f6aca · 08f6aca
1 parent dada3f8
commit 08f6aca
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diff --git a/test/cli/gold_standard/dna_both/minLen20.gff b/test/cli/gold_standard/dna_both/minLen20.gff
@@ -602,3 +602,100 @@ seq1	Stellar	eps-matches	739905	739923	95	+	.	seq2;seq2Range=623901,623920;cigar
 seq1	Stellar	eps-matches	841474	841492	95	+	.	seq2;seq2Range=619616,619635;cigar=9M1I10M;mutations=10A
 seq1	Stellar	eps-matches	912127	912145	95	+	.	seq2;seq2Range=281234,281253;cigar=3M1I16M;mutations=4A
 seq1	Stellar	eps-matches	997497	997515	95	+	.	seq2;seq2Range=570509,570528;cigar=15M1I4M;mutations=16G
+seq1	Stellar	eps-matches	765718	765740	95.6521	-	.	seq2;seq2Range=480465,480487;cigar=23M;mutations=15T
+seq1	Stellar	eps-matches	259870	259892	95.6521	-	.	seq2;seq2Range=242055,242077;cigar=23M;mutations=14T
+seq1	Stellar	eps-matches	986804	986825	95.4545	-	.	seq2;seq2Range=255704,255725;cigar=22M;mutations=9G
+seq1	Stellar	eps-matches	795116	795137	95.4545	-	.	seq2;seq2Range=100168,100188;cigar=15M1D6M;mutations=
+seq1	Stellar	eps-matches	590053	590074	95.4545	-	.	seq2;seq2Range=245228,245249;cigar=22M;mutations=17A
+seq1	Stellar	eps-matches	563210	563231	95.4545	-	.	seq2;seq2Range=355253,355274;cigar=22M;mutations=4A
+seq1	Stellar	eps-matches	353237	353258	95.4545	-	.	seq2;seq2Range=905108,905129;cigar=22M;mutations=3G
+seq1	Stellar	eps-matches	971517	971537	95.4545	-	.	seq2;seq2Range=55261,55282;cigar=9M1I12M;mutations=10T
+seq1	Stellar	eps-matches	960203	960223	95.238	-	.	seq2;seq2Range=617579,617598;cigar=19M1D1M;mutations=
+seq1	Stellar	eps-matches	887924	887944	95.238	-	.	seq2;seq2Range=527360,527380;cigar=21M;mutations=7T
+seq1	Stellar	eps-matches	814505	814525	95.238	-	.	seq2;seq2Range=546149,546168;cigar=8M1D12M;mutations=
+seq1	Stellar	eps-matches	721801	721821	95.4545	-	.	seq2;seq2Range=739398,739419;cigar=10M1I11M;mutations=11C
+seq1	Stellar	eps-matches	576858	576878	95.238	-	.	seq2;seq2Range=491562,491582;cigar=21M;mutations=3C
+seq1	Stellar	eps-matches	558950	558970	95.238	-	.	seq2;seq2Range=683633,683652;cigar=12M1D8M;mutations=
+seq1	Stellar	eps-matches	479518	479538	95.238	-	.	seq2;seq2Range=83080,83100;cigar=21M;mutations=19C
+seq1	Stellar	eps-matches	433635	433655	95.238	-	.	seq2;seq2Range=879014,879033;cigar=2M1D18M;mutations=
+seq1	Stellar	eps-matches	215664	215684	95.238	-	.	seq2;seq2Range=212347,212367;cigar=21M;mutations=10G
+seq1	Stellar	eps-matches	182569	182589	95.238	-	.	seq2;seq2Range=29771,29791;cigar=21M;mutations=13A
+seq1	Stellar	eps-matches	995415	995434	95	-	.	seq2;seq2Range=228306,228325;cigar=20M;mutations=8G
+seq1	Stellar	eps-matches	930403	930422	95	-	.	seq2;seq2Range=832382,832400;cigar=15M1D4M;mutations=
+seq1	Stellar	eps-matches	924969	924988	95	-	.	seq2;seq2Range=932201,932219;cigar=18M1D1M;mutations=
+seq1	Stellar	eps-matches	915539	915558	95.238	-	.	seq2;seq2Range=799352,799372;cigar=8M1I12M;mutations=9C
+seq1	Stellar	eps-matches	886471	886490	95	-	.	seq2;seq2Range=337574,337592;cigar=16M1D3M;mutations=
+seq1	Stellar	eps-matches	875106	875125	95	-	.	seq2;seq2Range=127516,127535;cigar=20M;mutations=9G
+seq1	Stellar	eps-matches	860711	860730	95	-	.	seq2;seq2Range=137910,137928;cigar=6M1D13M;mutations=
+seq1	Stellar	eps-matches	857248	857267	95.238	-	.	seq2;seq2Range=911396,911416;cigar=16M1I4M;mutations=17A
+seq1	Stellar	eps-matches	805362	805381	95	-	.	seq2;seq2Range=46863,46882;cigar=20M;mutations=4G
+seq1	Stellar	eps-matches	782079	782098	95	-	.	seq2;seq2Range=744396,744414;cigar=8M1D11M;mutations=
+seq1	Stellar	eps-matches	763601	763620	95	-	.	seq2;seq2Range=245161,245179;cigar=10M1D9M;mutations=
+seq1	Stellar	eps-matches	761138	761157	95	-	.	seq2;seq2Range=849566,849585;cigar=20M;mutations=7C
+seq1	Stellar	eps-matches	715611	715630	95	-	.	seq2;seq2Range=769274,769293;cigar=20M;mutations=11A
+seq1	Stellar	eps-matches	698067	698086	95	-	.	seq2;seq2Range=872432,872451;cigar=20M;mutations=4G
+seq1	Stellar	eps-matches	687547	687566	95	-	.	seq2;seq2Range=870365,870383;cigar=10M1D9M;mutations=
+seq1	Stellar	eps-matches	677977	677996	95	-	.	seq2;seq2Range=439433,439452;cigar=20M;mutations=11C
+seq1	Stellar	eps-matches	673645	673664	95	-	.	seq2;seq2Range=874398,874416;cigar=14M1D5M;mutations=
+seq1	Stellar	eps-matches	645038	645057	95	-	.	seq2;seq2Range=234191,234209;cigar=8M1D11M;mutations=
+seq1	Stellar	eps-matches	644858	644877	95	-	.	seq2;seq2Range=676277,676295;cigar=7M1D12M;mutations=
+seq1	Stellar	eps-matches	644813	644832	95	-	.	seq2;seq2Range=865801,865819;cigar=17M1D2M;mutations=
+seq1	Stellar	eps-matches	641510	641529	95	-	.	seq2;seq2Range=607675,607693;cigar=13M1D6M;mutations=
+seq1	Stellar	eps-matches	620345	620364	95	-	.	seq2;seq2Range=670708,670727;cigar=20M;mutations=16G
+seq1	Stellar	eps-matches	589984	590003	95	-	.	seq2;seq2Range=562730,562749;cigar=20M;mutations=3T
+seq1	Stellar	eps-matches	584612	584631	95.238	-	.	seq2;seq2Range=427382,427402;cigar=19M1I1M;mutations=20G
+seq1	Stellar	eps-matches	579568	579587	95	-	.	seq2;seq2Range=894330,894348;cigar=19M1D;mutations=
+seq1	Stellar	eps-matches	563144	563163	95	-	.	seq2;seq2Range=603709,603727;cigar=13M1D6M;mutations=
+seq1	Stellar	eps-matches	559003	559022	95.238	-	.	seq2;seq2Range=545195,545215;cigar=15M1I5M;mutations=16A
+seq1	Stellar	eps-matches	555342	555361	95	-	.	seq2;seq2Range=244036,244054;cigar=4M1D15M;mutations=
+seq1	Stellar	eps-matches	554010	554029	95	-	.	seq2;seq2Range=500180,500199;cigar=20M;mutations=19A
+seq1	Stellar	eps-matches	529470	529489	95.238	-	.	seq2;seq2Range=261759,261779;cigar=15M1I5M;mutations=16G
+seq1	Stellar	eps-matches	494432	494451	95	-	.	seq2;seq2Range=109070,109088;cigar=8M1D11M;mutations=
+seq1	Stellar	eps-matches	486491	486510	95	-	.	seq2;seq2Range=60990,61009;cigar=20M;mutations=14G
+seq1	Stellar	eps-matches	479793	479812	95	-	.	seq2;seq2Range=853178,853197;cigar=20M;mutations=12C
+seq1	Stellar	eps-matches	478520	478539	95	-	.	seq2;seq2Range=100372,100390;cigar=12M1D7M;mutations=
+seq1	Stellar	eps-matches	472552	472571	95	-	.	seq2;seq2Range=303200,303218;cigar=7M1D12M;mutations=
+seq1	Stellar	eps-matches	471158	471177	95.238	-	.	seq2;seq2Range=32620,32640;cigar=13M1I7M;mutations=14G
+seq1	Stellar	eps-matches	455364	455383	95.238	-	.	seq2;seq2Range=669817,669837;cigar=5M1I15M;mutations=6C
+seq1	Stellar	eps-matches	442608	442627	95	-	.	seq2;seq2Range=641357,641375;cigar=7M1D12M;mutations=
+seq1	Stellar	eps-matches	428970	428989	95	-	.	seq2;seq2Range=791789,791807;cigar=6M1D13M;mutations=
+seq1	Stellar	eps-matches	408714	408733	95	-	.	seq2;seq2Range=574104,574123;cigar=20M;mutations=6A
+seq1	Stellar	eps-matches	404450	404469	95	-	.	seq2;seq2Range=236052,236070;cigar=4M1D15M;mutations=
+seq1	Stellar	eps-matches	402092	402111	95	-	.	seq2;seq2Range=928807,928825;cigar=6M1D13M;mutations=
+seq1	Stellar	eps-matches	377549	377568	95	-	.	seq2;seq2Range=920264,920282;cigar=16M1D3M;mutations=
+seq1	Stellar	eps-matches	362963	362982	95	-	.	seq2;seq2Range=618522,618540;cigar=12M1D7M;mutations=
+seq1	Stellar	eps-matches	316447	316466	95.238	-	.	seq2;seq2Range=962072,962092;cigar=9M1I11M;mutations=10A
+seq1	Stellar	eps-matches	277755	277774	95	-	.	seq2;seq2Range=477270,477288;cigar=13M1D6M;mutations=
+seq1	Stellar	eps-matches	252314	252333	95	-	.	seq2;seq2Range=518921,518939;cigar=9M1D10M;mutations=
+seq1	Stellar	eps-matches	238268	238287	95.238	-	.	seq2;seq2Range=83582,83602;cigar=16M1I4M;mutations=17A
+seq1	Stellar	eps-matches	123831	123850	95	-	.	seq2;seq2Range=791401,791420;cigar=20M;mutations=15A
+seq1	Stellar	eps-matches	90438	90457	95	-	.	seq2;seq2Range=877934,877953;cigar=20M;mutations=6G
+seq1	Stellar	eps-matches	77396	77415	95	-	.	seq2;seq2Range=785298,785316;cigar=7M1D12M;mutations=
+seq1	Stellar	eps-matches	66376	66395	95	-	.	seq2;seq2Range=842457,842475;cigar=9M1D10M;mutations=
+seq1	Stellar	eps-matches	60971	60990	95	-	.	seq2;seq2Range=760087,760106;cigar=20M;mutations=13T
+seq1	Stellar	eps-matches	53898	53917	95	-	.	seq2;seq2Range=949225,949244;cigar=20M;mutations=10G
+seq1	Stellar	eps-matches	31264	31283	95	-	.	seq2;seq2Range=993852,993871;cigar=20M;mutations=4C
+seq1	Stellar	eps-matches	26503	26522	95	-	.	seq2;seq2Range=842546,842565;cigar=20M;mutations=9C
+seq1	Stellar	eps-matches	19458	19477	95	-	.	seq2;seq2Range=30538,30556;cigar=7M1D12M;mutations=
+seq1	Stellar	eps-matches	954644	954662	95	-	.	seq2;seq2Range=566182,566201;cigar=3M1I16M;mutations=4A
+seq1	Stellar	eps-matches	905577	905595	95	-	.	seq2;seq2Range=528544,528563;cigar=16M1I3M;mutations=17G
+seq1	Stellar	eps-matches	805470	805488	95	-	.	seq2;seq2Range=41851,41870;cigar=12M1I7M;mutations=13G
+seq1	Stellar	eps-matches	795190	795208	95	-	.	seq2;seq2Range=361614,361633;cigar=8M1I11M;mutations=9T
+seq1	Stellar	eps-matches	763547	763565	95	-	.	seq2;seq2Range=469456,469475;cigar=4M1I15M;mutations=5C
+seq1	Stellar	eps-matches	732502	732520	95	-	.	seq2;seq2Range=446091,446110;cigar=2M1I17M;mutations=3C
+seq1	Stellar	eps-matches	643822	643840	95	-	.	seq2;seq2Range=244584,244603;cigar=16M1I3M;mutations=17T
+seq1	Stellar	eps-matches	603126	603144	95	-	.	seq2;seq2Range=192740,192759;cigar=15M1I4M;mutations=16G
+seq1	Stellar	eps-matches	508105	508123	95	-	.	seq2;seq2Range=400207,400226;cigar=8M1I11M;mutations=9T
+seq1	Stellar	eps-matches	447396	447414	95	-	.	seq2;seq2Range=828387,828406;cigar=17M1I2M;mutations=18A
+seq1	Stellar	eps-matches	424852	424870	95	-	.	seq2;seq2Range=882879,882898;cigar=13M1I6M;mutations=14T
+seq1	Stellar	eps-matches	418601	418619	95	-	.	seq2;seq2Range=159496,159515;cigar=17M1I2M;mutations=18G
+seq1	Stellar	eps-matches	399065	399083	95	-	.	seq2;seq2Range=932045,932064;cigar=14M1I5M;mutations=15C
+seq1	Stellar	eps-matches	346392	346410	95	-	.	seq2;seq2Range=246662,246681;cigar=4M1I15M;mutations=5G
+seq1	Stellar	eps-matches	313455	313473	95	-	.	seq2;seq2Range=993116,993135;cigar=6M1I13M;mutations=7G
+seq1	Stellar	eps-matches	303067	303085	95	-	.	seq2;seq2Range=935085,935104;cigar=8M1I11M;mutations=9C
+seq1	Stellar	eps-matches	293473	293491	95	-	.	seq2;seq2Range=421802,421821;cigar=18M1I1M;mutations=19C
+seq1	Stellar	eps-matches	285955	285973	95	-	.	seq2;seq2Range=517350,517369;cigar=5M1I14M;mutations=6G
+seq1	Stellar	eps-matches	273607	273625	95	-	.	seq2;seq2Range=9351,9370;cigar=6M1I13M;mutations=7G
+seq1	Stellar	eps-matches	216605	216623	95	-	.	seq2;seq2Range=669253,669272;cigar=9M1I10M;mutations=10T
+seq1	Stellar	eps-matches	71324	71342	95	-	.	seq2;seq2Range=218249,218268;cigar=6M1I13M;mutations=7C
+seq1	Stellar	eps-matches	3331	3349	95	-	.	seq2;seq2Range=631237,631256;cigar=9M1I10M;mutations=10T