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Add Azure CE walkthrough to help highlight platform features #334

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@adamrtalbot adamrtalbot commented Dec 5, 2024

A walkthrough from least to most complex CE setup for Azure Batch.

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@justinegeffen
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Thanks, @adamrtalbot, this looks awesome. I've added a few reviewers. Is there a deadline that you have in mind for this in terms of publication?

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Thanks, @adamrtalbot, this looks awesome. I've added a few reviewers. Is there a deadline that you have in mind for this in terms of publication?

No - it's just been a recurring issues so I thought a solid walkthrough was required. It's a little bit dependent on #325 for full context.

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I started reviewing this and realized that my edits will be more effective if I edit directly. I'm submitting these anyway - @adamrtalbot, could you let me know if you're comfortable with me editing directly and if there's access to the UIs you reference in the tutorial?

---
title: Azure Batch Set Up
headline: "Azure Batch Compute Environment Tutorial"
description: "An walkthrough for using Azure Batch with Seqera Platform"
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We already have a 'how to use Azure Batch', but it's very surface level. This was more of a tutorial allowing users to run through a specific guide, so I'm not sure I like calling it "Use Azure Batch".

---
title: Azure Batch Set Up
headline: "Azure Batch Compute Environment Tutorial"
description: "An walkthrough for using Azure Batch with Seqera Platform"
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We already have a 'how to use Azure Batch', but it's very surface level. This was more of a tutorial allowing users to run through a specific guide, so I'm not sure I like calling it "Use Azure Batch".

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@justinegeffen merge your fixes away, happy for you to make any changes you think are appropriate.

Co-authored-by: Justine Geffen <[email protected]>
Signed-off-by: Adam Talbot <[email protected]>
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Note this one doesn't make much sense until #325 is merged.


It is common to attach Azure Batch pools to a virtual network. This is useful to connect to other resources in the same VNet or place things behind enhanced security. Seqera Platform does not support this feature directly, so you must manually create an Azure Batch pool.

See [Create a pool with a Virtual Network in the Azure portal](https://learn.microsoft.com/en-us/azure/batch/batch-virtual-network#create-a-pool-with-a-virtual-network-in-the-azure-portal) to create an Azure Batch pool manually that is compatible with Seqera and Nextflow. Use the following settings:
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@adamrtalbot This URL was still TODO before. Let me know if this docs link I plugged in is the appropriate one.

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Needs to be the one in #325 because there are a lot of specific requirements.

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