Code

feat: stacked CCL for huge arrays#127

Code

Merged

william-silversmith merged 15 commits intomasterseung-lab/connected-components-3d:masterfrom wms_stacked_cclseung-lab/connected-components-3d:wms_stacked_cclCopy head branch name to clipboardJul 23, 2024

+341-120

Commits

Commits on Jul 22, 2024

• refactor: move cc3d C++ logic and pure python logic away from each other

  william-silversmith

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  b141119

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Commits on Jul 23, 2024

• feat: 6-connected stacked ccl

  william-silversmith

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  91865cf

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• test: finish simple test of stacked ccl

  william-silversmith

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  ea0b28d

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• fix: errors in joining logic

  william-silversmith

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  fc859d3

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• feat+test: support 26 connectivity

  william-silversmith

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  5d76005

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• redesign: support only 6 or 26 connectivity

  william-silversmith

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  ae26d75

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• perf: refit ccl array as it comes out

  william-silversmith

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  eb1abcc

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• fix: off-by-one error

  william-silversmith

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  966ed4d

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• fix: dtype error for 0 sized arrays

  william-silversmith

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  486c642

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• fixtest: use fastremap.renumber

  william-silversmith

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  1833af2

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• fix: another off-by-one error

  william-silversmith

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  064a5bf

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• docs: show how to use connected_components_stack

  william-silversmith

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  10a53b2

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• docs: tell users how to fix import errors

  william-silversmith

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  0effb62

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• install: fix name of "extras_requires"

  william-silversmith

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  4496450

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• docs: how to install

  william-silversmith

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