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Update column type for raw_data.Demultiplexed_Reads #74

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merged 4 commits into from
Dec 16, 2024
Merged

Update column type for raw_data.Demultiplexed_Reads #74

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6ede324
Update column type for raw_data.Demultiplexed_Reads
TCLamnidis Dec 13, 2024
81c7b77
Fix column shift caused by extra NA.
TCLamnidis Dec 15, 2024
b92a2b4
Update pandora_column_types.rda
TCLamnidis Dec 15, 2024
58dcaaf
Update sysdata.rda
TCLamnidis Dec 15, 2024
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Binary file modified R/sysdata.rda
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10 changes: 5 additions & 5 deletions data-raw/pandora_column_types.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ TAB_Raw_Data raw_data Raw_Data_Id character NA NA NA
TAB_Raw_Data raw_data Full_Raw_Data_Id character NA NA NA
TAB_Raw_Data raw_data Protocol integer TAB_Protocol Name NA
TAB_Raw_Data raw_data Creation_Date datetime NA NA NA
TAB_Raw_Data raw_data Demultiplexed_Reads integer NA NA NA
TAB_Raw_Data raw_data Demultiplexed_Reads big_integer NA NA NA
TAB_Raw_Data raw_data FastQ_Files character NA NA NA
TAB_Raw_Data raw_data Public_Database_Accessions character NA NA NA
TAB_Raw_Data raw_data Pubmed_Id character NA NA NA
Expand Down Expand Up @@ -101,7 +101,7 @@ TAB_Individual individual Id integer NA NA NA
TAB_Individual individual Site integer NA NA NA
TAB_Individual individual Individual_Id integer NA NA mandatory
TAB_Individual individual Full_Individual_Id character NA NA NA
TAB_Individual individual Main_Individual_Id integer NA NA NA optional
TAB_Individual individual Main_Individual_Id integer NA NA optional
TAB_Individual individual Institution_of_Origin integer TAB_Owner Name mandatory
TAB_Individual individual Contact_Person character NA NA optional
TAB_Individual individual Provenience character NA NA optional
Expand Down Expand Up @@ -142,7 +142,7 @@ TAB_Individual individual Files integer NA NA optional
TAB_Individual individual Notes character NA NA optional
TAB_Individual individual Tags character NA NA optional
TAB_Individual individual Projects character NA NA optional
TAB_Individual individual Exclude yesno_logical NA NA NA optional
TAB_Individual individual Exclude yesno_logical NA NA optional
TAB_Individual individual Deleted logical NA NA NA
TAB_Individual individual Deleted_Date datetime NA NA NA
TAB_Sample sample Id integer NA NA NA
Expand Down Expand Up @@ -173,7 +173,7 @@ TAB_Sample sample Deleted logical NA NA NA
TAB_Sample sample Deleted_Date datetime NA NA NA
TAB_Sample sample CoreDB_Id character NA NA optional
TAB_Sample sample CT_scanned yesno_logical NA NA optional
TAB_Sample sample Exclude yesno_logical NA NA NA optional
TAB_Sample sample Exclude yesno_logical NA NA optional
TAB_Extract extract Id integer NA NA NA
TAB_Extract extract Sample integer NA NA NA
TAB_Extract extract Extract_Id character NA NA mandatory
Expand Down Expand Up @@ -201,7 +201,7 @@ TAB_Extract extract Deleted_Date datetime NA NA NA
TAB_Extract extract CoreDB_Id character NA NA optional
TAB_Extract extract CoreDB_Lysate_Id character NA NA optional
TAB_Extract extract CoreDB_Subsample_Id character NA NA optional
TAB_Extract extract Exclude yesno_logical NA NA NA optional
TAB_Extract extract Exclude yesno_logical NA NA optional
TAB_Library library Id integer NA NA NA
TAB_Library library Extract integer NA NA NA
TAB_Library library Library_Id integer NA NA mandatory
Expand Down
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