0.6.2 release

sigven · Nov 25, 2021 · 1b26a54 · 1b26a54
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Showing 8 changed files with 29 additions and 10 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -2,7 +2,7 @@ Package: oncoPharmaDB
 Type: Package
 Title: Dataset with targeted and non-targeted anticancer drugs
 Version: 0.6.2
-Date: 2021-11-07
+Date: 2021-11-25
 Authors@R: 
     c(person(given = "Sigve",
              family = "Nakken",
@@ -15,12 +15,16 @@ Description: This data package collects aticancer drug information from multiple
     contains a list of all anticancer drugs per indication/tumor type (where this is provided),
     which can further be queried with a range of parameters (minimum clinical phase, approval
     status, targets, drug category etc.)
-License: MIT
+License: MIT + file LICENSE
 URL: https://github.com/sigven/oncoPharmaDB
 BugReports: https://github.com/sigven/oncoPharmaDB/issues
 Depends: 
     R (>= 3.6.0)
-Imports: tidyverse (>= 1.3.1), assertthat (>= 0.2.1)
+Imports: dplyr,
+         stringr,
+         magrittr,
+         rlang,
+         assertthat (>= 0.2.1)
 Encoding: UTF-8
 LazyData: true
 RoxygenNote: 7.1.2

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,8 @@
+# Version 0.6.2 (November 25th 2021)
+
+* Data update: Open Targets Platform (2021.11)
+* General code/documentation improvements - following `devtools::check()`
+
 # Version 0.6.1 (October 28th 2021)
 
 * Data update: NCI Thesaurus (21.10d)

diff --git a/README.md b/README.md
@@ -24,9 +24,10 @@ Anti-cancer drugs are currently provided with the following tentative drug categ
 * Topoisomerase inhibitors
 * Tubulin inhibitors
 
-Currently (as of October 28th 2021), the following versions are used to create the mapping:
+Currently (as of November 25th 2021), `oncoPharmaDB` is built upon the following 
+releases of external databases:
 
- - Open Targets Platform (2021.09)
+ - Open Targets Platform (2021.11)
  - ChEMBL (v29)
  - NCI Thesaurus (21.10d)
 
@@ -93,4 +94,4 @@ sigven AT ifi.uio.no
 
 ### Code of Conduct
 
-Please note that this project is released with a [Contributor Code of Conduct](https://github.com/sigven/oncoPharmaDB/blob/master/.github/CODE_OF_CONDUCT.md). By participating in this project you agree to abide by its terms.
+Please note that this project is released with a [Contributor Code of Conduct](https://github.com/sigven/oncoPharmaDB/blob/main/.github/CODE_OF_CONDUCT.md). By participating in this project you agree to abide by its terms.
diff --git a/data/oncopharma_synonyms.rda b/data/oncopharma_synonyms.rda
diff --git a/data/oncopharmadb.rda b/data/oncopharmadb.rda
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/news/index.html b/docs/news/index.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -2,5 +2,5 @@ pandoc: 2.14.0.3
 pkgdown: 1.6.1
 pkgdown_sha: ~
 articles: {}
-last_built: 2021-11-25T12:06Z
+last_built: 2021-11-25T19:09Z