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Releases: sigven/pharmOncoX

v0.7.2

30 Mar 12:59
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  • fixed bug in installation instruction

v0.7.1

30 Mar 08:51
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  • NCI Thesaurus update (22.03d)
  • CIViC update (20220330)

v0.7.0

04 Mar 21:47
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  • NCI Thesarusus update + Open Targets Platform
  • Biomarker update (CIViC)

v0.6.9

09 Feb 15:09
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  • added FDA NDC codes
  • updated NCI Thesaurus

v0.6.6

17 Jan 10:16
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  • Fixed bug in exported oncopharmadb data.frame
  • Updated biomarkers

v0.6.5

10 Jan 23:53
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  • NCI Thesaurus 2021.12d
  • Added preliminary set of drug biomarkers, data frames that can be acccessed directly through
    • oncoPharmaDB::compound_biomarkers$curated - curated evidence linking genomic aberrations to drug response - harvested from CIViC, CGI, and PMKB
    • oncoPharmaDB::compound_biomarkers$invitro_screen - from DepMap/PRISM, indicating predictive omics features of drug response in cancer cell lines

v0.6.3

03 Dec 09:04
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  • NCI Thesaurus update (v21.11e)

v0.6.2 - OTP 2021.11

25 Nov 19:16
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  • code/documentation improvements after devtools::check()
  • data from Open Targets Platform

v0.6.1

28 Oct 13:41
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  • Data update: NCI Thesaurus (21.10d)
  • Removed some redundant/non-informative columns of main data frame (oncopharmadb)
    • target_chembl_id
    • drug_synonyms
    • drug_description
    • drug_moa
    • drug_tradenames
    • cancer_drug
  • Documented exported data objects (oncopharmadb and oncopharma_synonyms)
  • Annotated gonadotropin releasing hormone analogues with hormone_therapy label
  • Added platinum_compound as a dedicated drug category (and as a column in oncopharmadb)
    • New argument is_platinum_compound to get_onco_drugs()

v0.6.0 - OTP 2021.09

30 Sep 15:49
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  • Retrieved latest drug collection (release 2021.09) from Open Targets Platform (ChEMBL++)