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Refactor fetching #669

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@LilianBoulard LilianBoulard commented Jul 20, 2023

The goal of this PR is to refactor the fetching system to:

  • Rely on the sklearn cache implementation of fetch_openml, which makes a lot of our code outdated
  • Simplify the private API
  • Separate the public from the private API, since the file is about 1K lines long, making it hard to work with
  • Simplify the Dataset API, so that we don't return different objects depending on the value of load_dataframe
  • Align with the API of sklearn's fetchers

@LilianBoulard LilianBoulard added the enhancement New feature or request label Jul 20, 2023
@LilianBoulard LilianBoulard self-assigned this Jul 20, 2023
@LilianBoulard LilianBoulard marked this pull request as draft July 20, 2023 16:56
…tor_fetching

# Conflicts:
#	benchmarks/utils/_various.py
#	skrub/datasets/__init__.py
@GaelVaroquaux
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Hold your horses :)

We have too many things happening right now to undertake a refactor. Let's wait a few days to merge a few things and have less ongoing modifications in the code base.

@GaelVaroquaux
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GaelVaroquaux commented Aug 3, 2023 via email

@LilianBoulard
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LilianBoulard commented Aug 3, 2023

From my quick analysis of the test error, it seems there is a difference somewhere in fetch_world_bank_indicator, which causes the indices of the two tables to mismatch. However, doing self.X.reset_index(drop=True).equals(other.X.reset_index(drop=True)) in Dataset.__eq__ doesn't work either, and I don't know why yet.

Edit: it was a dtype mismatch, thanks @Vincent-Maladiere

@LilianBoulard LilianBoulard marked this pull request as ready for review August 3, 2023 16:24
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