Update for Library 2.0 (#22)

* Add a smoke-test basic test suite * Update for cumulus_library 2.0
smart-on-fhir · Apr 23, 2024 · 025bdae · 025bdae
1 parent be0f8c2
commit 025bdae
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diff --git a/.gitignore b/.gitignore
@@ -3,6 +3,7 @@ data_export/
 .python-version
 .DS_Store
 cumulus_library_columns.json
+/.idea/
 
 # Byte-compiled / optimized / DLL files
 __pycache__/

diff --git a/cumulus_library_hypertension/htn/counts.py b/cumulus_library_hypertension/htn/counts.py
@@ -1,5 +1,5 @@
 from pathlib import Path
-from cumulus_library.schema.counts import CountsBuilder
+from cumulus_library.statistics.counts import CountsBuilder
 
 class HtnCountsBuilder(CountsBuilder):
     display_text = "Creating htn counts..."
@@ -137,7 +137,7 @@ def count_procedure(self, duration=None):
 
         return self.count_encounter(view_name, from_table, cols)
 
-    def prepare_queries(self, cursor=None, schema=None):
+    def prepare_queries(self, *args, **kwargs):
         self.queries =[
             self.count_study_period(),
             self.count_study_period('month'),