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Question about using hdWGCNA output to get propensity of two proteins interacting #345

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Rohit-Satyam opened this issue Dec 24, 2024 · 0 comments
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@Rohit-Satyam
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I am new to single-cell-based Protein-protein interaction identification based on coexpression. I am trying to use your package for this purpose. So far I can follow the vignette. I have labeled data from published studies about the cell type and I want to build now cell type-specific PPI network based on WGCNA. For given two genes, how can I get correlation coefficient or something measurable that I can use to split the gene-pairs into interacting and non-interacting?

@Rohit-Satyam Rohit-Satyam added the question Further information is requested label Dec 24, 2024
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