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Issues list

Question about v5 update question Further information is requested
#347 opened Dec 27, 2024 by shiave
1
ConstructNetwork() Error in apply(scoreAll[modGenes[candidates], ], 1, which.max) : dim(X) must have a positive length question Further information is requested
#346 opened Dec 26, 2024 by QWDxxx
Question about using hdWGCNA output to get propensity of two proteins interacting question Further information is requested
#345 opened Dec 24, 2024 by Rohit-Satyam
Access to older version of hdWGCNA? question Further information is requested
#344 opened Dec 18, 2024 by Dimmiso
2
MotifScan fails when there is a gene with more than one motif
#343 opened Dec 16, 2024 by jmodlis
Module preservation between multiple species question Further information is requested
#342 opened Dec 11, 2024 by FraMont2
'wgcna_modules' slot of Seurat object has no rows question Further information is requested
#341 opened Dec 4, 2024 by dougbarrows
2
Question about frequency and correlation in TF regulatory networks question Further information is requested
#340 opened Dec 2, 2024 by Sara-Tavallaei
4
Issue with KMe Calculation : PlotKMEs and GetHubGenes Incomplete
#338 opened Nov 29, 2024 by tetsy2
6
'Error in EnrichrBarPlot(... : object 'dbs' not found'
#337 opened Nov 26, 2024 by stephanieRedmond
Question about [my question]Error in !CheckWGCNAName(seurat_obj, wgcna_name) : invalid argument type question Further information is requested
#334 opened Nov 15, 2024 by RGT183
5
Question about multiple spatial samples question Further information is requested
#333 opened Nov 14, 2024 by atrostleSW
4
Question about proportion of genes assigned to grey module question Further information is requested
#331 opened Nov 13, 2024 by ddressman91
1
Error in ConstructPseudobulk (argument is not a matrix) when I don't specify label_col
#327 opened Oct 30, 2024 by ddressman91
2
Question about the possibility of using external metacell asssignment question Further information is requested
#310 opened Sep 10, 2024 by pmandros
2
Co-expression module dynamics with pseudotime cannot run the module dynamics graphs
#306 opened Sep 2, 2024 by CamiCalamity
2
no applicable method for 'JoinLayers' applied to an object of class "c('Assay', 'KeyMixin') question Further information is requested
#296 opened Jul 19, 2024 by DLY-2021
4
MetacellsByGroups -> "Error in apply(cell_sample, 1, function(x) { : dim(X) must have a positive length" question Further information is requested
#290 opened Jul 9, 2024 by MJD-BlanckGroup
5
Seeking parameter suggestions for hdwgcna question Further information is requested
#285 opened Jun 26, 2024 by xjyenjoy81
2
ConstructMetaspots not compatible with Seurat's VisiumV2 class
#278 opened Jun 12, 2024 by ppm1337
6
Error when running "ModuleEigengenes()" with a seurat.v5 object
#271 opened May 30, 2024 by Zweig-Wong
5
Tweaking the number of modules question Further information is requested
#252 opened Apr 4, 2024 by Thapeachydude
2
Error with MetaspotsByGroups and ConstructMetaspots
#250 opened Mar 29, 2024 by liuxiawei
4
Conda Skeleton for Workflow Integration enhancement New feature or request
#229 opened Feb 29, 2024 by shahrozeabbas
1
ModuleFeaturePlot - add split.by option enhancement New feature or request
#227 opened Feb 26, 2024 by ashleshagogate
1
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