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try free-disk-space Action and unpin snakemake for linting, as well
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@@ -29,7 +29,7 @@ jobs: | |
steps: | ||
- uses: actions/checkout@v2 | ||
- name: Lint workflow | ||
uses: snakemake/snakemake-github-action@v1.25.1 | ||
uses: snakemake/snakemake-github-action@v1 | ||
with: | ||
directory: . | ||
snakefile: workflow/Snakefile | ||
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@@ -42,6 +42,22 @@ jobs: | |
- Linting | ||
- Formatting | ||
steps: | ||
- name: Free Disk Space (Ubuntu) | ||
uses: jlumbroso/[email protected] | ||
with: | ||
# this might remove tools that are actually needed, | ||
# if set to "true" but frees about 6 GB | ||
tool-cache: false | ||
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||
# all of these default to true, but feel free to set to | ||
# "false" if necessary for your workflow | ||
android: true | ||
dotnet: true | ||
haskell: true | ||
large-packages: true | ||
docker-images: true | ||
swap-storage: true | ||
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- uses: actions/checkout@v2 | ||
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- name: Test workflow (local FASTQs) | ||
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