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add decorator skipping nodes without dimensions
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from typing import Callable, Any | ||
from xarray import Dataset | ||
import functools | ||
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def skip_non_dimension_nodes( | ||
func: Callable[[Dataset], Dataset], | ||
) -> Callable[[Dataset], Dataset]: | ||
"""Skip nodes in Datatree that do not contain dimensions. | ||
This function implements the workaround of https://github.com/pydata/xarray/issues/9693. In particular, | ||
we need this because of our DataTree representing multiscale image having a root node that does not have | ||
dimensions. Several functions need to be mapped over the datasets in the datatree that depend on having | ||
dimensions, e.g. a transpose. | ||
""" | ||
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@functools.wraps(func) | ||
def _func(ds: Dataset, *args: Any, **kwargs: Any) -> Dataset: | ||
# check if dimensions are present otherwise return verbatim | ||
if len(ds.dims) == 0: | ||
return ds | ||
return func(ds, *args, **kwargs) | ||
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return _func |