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To fit <100MB github requirement
derivatives/labels folder and csfseg-manual masks
Fix wrong acquisition date in participants.tsv
Implement CI testing for BIDS
Add manually corrected dwi SC segmentations.
Update dwi SC seg for sub-vuiisAchieva06
Add manually corrected dwi SC segmentations
- remove sapienza04 gmseg - correct gmseg for sapienza01
manual correction of t1w and t2w images
* fix defaced image * change permissions * add fslPrisma dataset * rename sapienza to fslAchieva * deface images * fix defacing dresden02_T2w * remove other defaced images * rename test * fix rename
@kousu ok to continue opening PR here or should we move to the new git-annex? |
Sorry, but after #20, can you re-submit this over at the new https://github.com/spine-generic/data-multi-subject ? Because this PR touched NifTis, it's going to need more steps than #26 to integrate. It might be easiest if you just started fresh:
Then to upload your work, follow https://github.com/kousu/data-multi-subject/blob/git-annex-docs/CONTRIBUTING.md. In particular, @jcohenadad has to make you a key for Amazon. With that in hand, do:
This will tell you it's uploading the NifTis to Amazon and the rest to Github. If not, try the more explicit version on CONTRIBUTING.md. Then you should be able to re-create the pull request from the new branch. I'm sorry about all this. Migrations are painful. |
This PR has now been ported to spine-generic/data-multi-subject#19 |
The issues signalled here: spine-generic/data-multi-subject#21 (comment)
Fixes: spine-generic/data-multi-subject#22
Here are the details concerning the file permissions.