Bump up version and run devtools::document()

stephenslab · May 29, 2024 · 4cabe70 · 4cabe70
1 parent e5bf27b
commit 4cabe70
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Showing 2 changed files with 8 additions and 5 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Encoding: UTF-8
 Type: Package
 Package: mr.mash.alpha
-Version: 0.3.26
-Date: 2024-05-28
+Version: 0.3.27
+Date: 2024-05-29
 Title: Multiple Regression with Multivariate Adaptive Shrinkage
 Description: Provides an implementation of methods for multivariate 
     multiple regression with adaptive shrinkage priors.
@@ -18,15 +18,15 @@ License: MIT + file LICENSE
 Depends: R (>= 3.1.0)
 Imports:
     stats,
+    Matrix,
     Rcpp (>= 1.0.7),
     RcppParallel (>= 5.1.5),
     mvtnorm,
     matrixStats,
     mashr (>= 0.2.73),
     ebnm,
     flashier (>= 1.0.7),
-    parallel,
-    Rfast
+    parallel
 Suggests:
     testthat,
     varbvs,

diff --git a/NAMESPACE b/NAMESPACE
@@ -16,11 +16,14 @@ export(mr.mash.rss)
 export(predict.mr.mash)
 export(predict.mr.mash.rss)
 export(simulate_mr_mash_data)
+importFrom(Matrix,crossprod)
+importFrom(Matrix,diag)
+importFrom(Matrix,isSymmetric)
+importFrom(Matrix,t)
 importFrom(Rcpp,evalCpp)
 importFrom(RcppParallel,RcppParallelLibs)
 importFrom(RcppParallel,defaultNumThreads)
 importFrom(RcppParallel,setThreadOptions)
-importFrom(Rfast,is.symmetric)
 importFrom(ebnm,ebnm_normal)
 importFrom(ebnm,ebnm_normal_scale_mixture)
 importFrom(flashier,flash)