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fix cases when regions are absent from motif.matrix #1802

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lldelisle wants to merge 1 commit into stuart-lab:master from lldelisle:fix_cases_not_all_peaks_have_motifs

lldelisle commented Oct 14, 2024

Hi,
I tried to run RunChromVAR and I got:

Error in .subscript.2ary(x, i, , drop = drop) : 
  logical subscript too long

I realized it was because the motif matrix was smaller than the peak matrix (some peaks have no motif).

I propose here a bug fix.


          fix cases when regions are absent from motif.matrix

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lldelisle commented Oct 15, 2024

I think #1803 is a better fix.

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