Skip to content
@Submissions

BCM-HGSC Submissions

Tools used by the Submissions team at Baylor College of Medicine Human Genome Sequencing Center

Popular repositories Loading

  1. Storage_automation Storage_automation Public

    This will be used to merge several spreadsheets for a storage report

    Python 1 2

  2. PyBy-Converter PyBy-Converter Public

    A very simple python script for converting bytes to MB, GB, TB

    Python 1 1

  3. batch_vcfs batch_vcfs Public

    Process a batch of SNP and indel VCF files as read from an XLSX file

    Python 1

  4. relascope relascope Public

    Records recursive measurements of filesystem directories

    Python

  5. gzip_md5_temp gzip_md5_temp Public

    Python

  6. seneschal seneschal Public

    Seneschal is an automation system that serves as a restricted control interface between users and a protected environment.

    Python

Repositories

Showing 10 of 17 repositories
  • shepherd Public

    A set of scripts for defining batches of work that are then tracked to failure or (possibly partial) completion.

    Submissions/shepherd’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 10, 2019
  • PyBy-Converter Public

    A very simple python script for converting bytes to MB, GB, TB

    Submissions/PyBy-Converter’s past year of commit activity
    Python 1 1 1 0 Updated Aug 20, 2019
  • cram-processing-tools Public

    *For use by the Submissions Team* A collection of scripts and steps for sharing data (initially used as a part of the TOPMed submissions pipeline)

    Submissions/cram-processing-tools’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Jul 30, 2019
  • pipelines-java Public Forked from MicrosoftDocs/pipelines-java

    Sample Java application referred to by Azure Pipelines documentation

    Submissions/pipelines-java’s past year of commit activity
    Java 0 CC-BY-4.0 10,184 0 1 Updated Jul 22, 2019
  • fhir-specification Public Forked from emerge-ehri/fhir-specification

    eMERGE FHIR Specification

    Submissions/fhir-specification’s past year of commit activity
    0 1 0 0 Updated Jul 9, 2019
  • MFTS-issues Public
    Submissions/MFTS-issues’s past year of commit activity
    0 0 0 0 Updated Jul 1, 2019
  • submissions-training Public

    Resources for internal training

    Submissions/submissions-training’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 13, 2018
  • fglob Public

    Process lists of glob patterns

    Submissions/fglob’s past year of commit activity
    Python 0 MIT 0 0 0 Updated May 22, 2018
  • hgsc-archive-tools Public
    Submissions/hgsc-archive-tools’s past year of commit activity
    Python 0 0 0 0 Updated Apr 16, 2018
  • scripts-for-nexus-pipeline Public

    Internal scripts for working with DNAnexus

    Submissions/scripts-for-nexus-pipeline’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Apr 10, 2018
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…